RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TAPT1Q6NXT6 567 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 BBS12Q6ZW61 710 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 SLC40A1Q9NP59 571 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 HAUS2Q9NVX0 235 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 ALOX15BO15296 676 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 RASSF9O75901 435 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 LAMC2Q13753 1193 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 FAM187BQ17R55 369 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 CCDC142Q17RM4 750 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 UNC45BQ8IWX7 931 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 TGS1Q96RS0 853 aaKnown RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 ABCF3Q9NUQ8 709 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 WDR35Q9P2L0 1181 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 GRAP2O75791 330 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 NDST1P52848 882 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 TMEM132DQ14C87 1099 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 PKN2Q16513 984 aaKnown RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 FAM133BQ5BKY9 247 aaKnown RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 ARHGEF18Q6ZSZ5 1173 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 CEP128Q6ZU80 1094 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 CENPUQ71F23 418 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 RFX6Q8HWS3 928 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 LINC01465Q8N7H1 131 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 CPT1BQ92523 772 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 P3H4Q92791 437 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 ASB7Q9H672 318 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 SHOC2Q9UQ13 582 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 EFR3BQ9Y2G0 817 aa12.56□□□□□ -0.4
TP53-227ENST00000622645 USP15Q9Y4E8 981 aaPredicted RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
TP53-227ENST00000622645 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 RNF8O76064 485 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 CYP3A5P20815 502 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 RPL22P35268 128 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 WDR4P57081 412 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 HIF1AQ16665 826 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 FNBP1LQ5T0N5 605 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 TRNP1Q6NT89 227 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 TRABD2AQ86V40 505 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 FAM71DQ8N9W8 422 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 CMASQ8NFW8 434 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 PEBP4Q96S96 227 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 TRUB2O95900 331 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 OAS1P00973 400 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 HMGCRP04035 888 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 GHRP10912 638 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 VDRP11473 427 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 KRT15P19012 456 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 ADORA2AP29274 412 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 SSTR1P30872 391 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 ATICP31939 592 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 FOXN2P32314 431 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 GPX6P59796 221 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 POU5F1BQ06416 359 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 TAZQ16635 292 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 CDO1Q16878 200 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 C15orf59Q2T9L4 293 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 SUGP1Q8IWZ8 645 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 C4orf33Q8N1A6 199 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 CYP3A43Q9HB55 503 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 KLC4Q9NSK0 619 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 GINS2Q9Y248 185 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 ACTL7BQ9Y614 415 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 DICER1Q9UPY3 1922 aaKnown RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 FAM47DPA6NHR8 397 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 E5RJQ4 531 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 MAGEB2O15479 319 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 TSPAN1O60635 241 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 GABRB2P47870 512 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 GSCP56915 257 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 NPNTQ6UXI9 565 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms