RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 SSU72Q9NP77 194 aaKnown RBP13.65□□□□□ -0.22
CHD1L-210ENST00000622533 ARHGEF4Q9NR80 690 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 GOLGA8SH3BPF8 625 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 GOLGA8MH3BSY2 632 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 FCHO1O14526 889 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 PGM3O95394 542 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 CLDN10P78369 228 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 DBN1Q16643 649 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 PLEKHA7Q6IQ23 1121 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
CHD1L-210ENST00000622533 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
CHD1L-210ENST00000622533 THTPAQ9BU02 230 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
CHD1L-210ENST00000622533 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
CHD1L-210ENST00000622533 DRG1Q9Y295 367 aaKnown RBP13.65□□□□□ -0.22
CHD1L-210ENST00000622533 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ARL4CP56559 192 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 MRPS9P82933 396 aaKnown RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 CDK16Q00536 496 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 KDSRQ06136 332 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 SPP2Q13103 211 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 UGCGQ16739 394 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ZBED8Q8IZ13 594 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF276Q8N554 614 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 MCPH1Q8NEM0 835 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF398Q8TD17 642 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 CLEC4DQ8WXI8 215 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 PHACTR1Q9C0D0 580 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 FETUBQ9UGM5 382 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF510Q9Y2H8 683 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 FAM237BA0A1B0GVD1 139 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 LIASO43766 372 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 EXTL3O43909 919 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF862O60290 1169 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 MYL2P10916 166 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 PDIA2Q13087 525 aaKnown RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 SLC39A4Q6P5W5 647 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
CHD1L-210ENST00000622533 OLFM3Q96PB7 478 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
CHD1L-210ENST00000622533 A8MXQ7 604 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 NFIBO00712 420 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 CRABP2P29373 138 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PSMD6Q15008 389 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 LPCAT4Q643R3 524 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 XRRA1Q6P2D8 792 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 CENPUQ71F23 418 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PCGF5Q86SE9 256 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TREML1Q86YW5 311 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SCUBE1Q8IWY4 988 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 STKLD1Q8NE28 680 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TUBB6Q9BUF5 446 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SHOC2Q9UQ13 582 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PTPN7P35236 360 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TAS2R40P59535 323 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 NOMO3P69849 1222 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 MAP7Q14244 749 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SFT2D3Q587I9 215 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 ALLCQ8N6M5 410 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 CCDC110Q8TBZ0 833 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 SYTL5Q8TDW5 730 aaPredicted RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 C11orf70Q9BRQ4 267 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 PSMC3IPQ9P2W1 217 aaPredicted RBP13.63□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF148Q9UQR1 794 aa13.63□□□□□ -0.23
CHD1L-210ENST00000622533 TBC1D30Q9Y2I9 924 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms