RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 ZIC5Q96T25 663 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 LIASO43766 372 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 LMO2P25791 158 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 MIPP30301 263 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 GPD2P43304 727 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 DRG2P55039 364 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 PTGISQ16647 500 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 ADAMTS10Q9H324 1103 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 PPME1Q9Y570 386 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 GPR32O75388 356 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 CDKN2BP42772 138 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 PTK6Q13882 451 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 ZC3H18Q86VM9 953 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
AGAP3-226ENST00000622464 SPTLC1O15269 473 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 CLUL1Q15846 466 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 TTC30AQ86WT1 665 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 ANKMY2Q8IV38 441 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 ZFP42Q96MM3 310 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 OSBPL7Q9BZF2 842 aa13.75□□□□□ -0.21
AGAP3-226ENST00000622464 F5H423 210 aaPredicted RBP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RASGRF2O14827 1237 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RARGP13631 454 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 CHN1P15882 459 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RBP5P82980 135 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 MFSD10Q14728 455 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 CCNG2Q16589 344 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 FAM187BQ17R55 369 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RHBDF2Q6PJF5 856 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 CYP4X1Q8N118 509 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 NFKBIZQ9BYH8 718 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 NINJ2Q9NZG7 142 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RPS6KA5O75582 802 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 PFKMP08237 780 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ACAT1P24752 427 aaKnown RBP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 LIG3P49916 1009 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 MNAT1P51948 309 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ZC3H12AQ5D1E8 599 aaKnown RBP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RCOR2Q8IZ40 523 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 KCTD6Q8NC69 237 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ARRDC4Q8NCT1 418 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 ASB7Q9H672 318 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 SAYSD1Q9NPB0 183 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 BARX2Q9UMQ3 279 aaPredicted RBP13.74□□□□□ -0.21
AGAP3-226ENST00000622464 NEU2Q9Y3R4 380 aa13.74□□□□□ -0.21
AGAP3-226ENST00000622464 SYNJ2BP-COX16A0A087WUM0 186 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 MED7O43513 233 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 FGFR1P11362 822 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 MAP2K2P36507 400 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 AUHQ13825 339 aaKnown RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 TFDP3Q5H9I0 405 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 CTU1Q7Z7A3 348 aaKnown RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 TAX1BP1Q86VP1 789 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 SUGP1Q8IWZ8 645 aaKnown RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 GCOM2Q9BZD3 368 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 COX16Q9P0S2 106 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 C3orf70A6NLC5 250 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 ATP2C2O75185 946 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 GABBR2O75899 941 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 TJP3O95049 919 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 PGK1P00558 417 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 PDGFRAP16234 1089 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 CTGFP29279 349 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 CDH5P33151 784 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 MYCBPAPQ8TBZ2 947 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 ZNF473Q8WTR7 871 aaKnown RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 NT5C1AQ9BXI3 368 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 ADAM7Q9H2U9 754 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 TCRBV7S3A2A0A539 114 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 NUDT17P0C025 328 aa13.73□□□□□ -0.21
AGAP3-226ENST00000622464 C6orf222P0C671 652 aaPredicted RBP13.73□□□□□ -0.21
AGAP3-226ENST00000622464 LCP1P13796 627 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms