RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 PSAPP07602 524 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 YY1P25490 414 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 LBRQ14739 615 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 LRRC8BQ6P9F7 803 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 DEFB132Q7Z7B7 95 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 MAELQ96JY0 434 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 IMPG2Q9BZV3 1241 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 TJP2Q9UDY2 1190 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 FSCN2O14926 492 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 TP73O15350 636 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 OPHN1O60890 802 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 RGS20O76081 388 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 DRG2P55039 364 aaKnown RBP11.21□□□□□ -0.61
CDH1-214ENST00000621016 MAMLD1Q13495 774 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 NCOA4Q13772 614 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 EMC2Q15006 297 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 CIAPIN1Q6FI81 312 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 SLC7A3Q8WY07 619 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 PITPNM3Q9BZ71 974 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 NMRK1Q9NWW6 199 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 MYPNQ86TC9 1320 aa11.21□□□□□ -0.61
CDH1-214ENST00000621016 NVLO15381 856 aaKnown RBP11.21□□□□□ -0.62
CDH1-214ENST00000621016 ITIH2P19823 946 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 CA4P22748 312 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 MAGEA4P43358 317 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 RAP1GAPP47736 663 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 RTP1P59025 263 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 VSTM1Q6UX27 236 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 RHOT1Q8IXI2 618 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 NSUN6Q8TEA1 469 aaKnown RBP11.21□□□□□ -0.62
CDH1-214ENST00000621016 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 LRRC19Q9H756 370 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 RNF19AQ9NV58 838 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 STK32BQ9NY57 414 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 NEU2Q9Y3R4 380 aa11.21□□□□□ -0.62
CDH1-214ENST00000621016 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 SNX3O60493 162 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 DNAJC6O75061 913 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 STK10O94804 968 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 SUN1O94901 812 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 UNGP13051 313 aaPredicted RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 CALB2P22676 271 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 SFNP31947 248 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 CDH8P55286 799 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 COPS2P61201 443 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 CUL2Q13617 745 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 LRP8Q14114 963 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 VSIG1Q86XK7 387 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 SDR16C5Q8N3Y7 309 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 GBP7Q8N8V2 638 aaPredicted RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 TRAPPC12Q8WVT3 735 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 GMLQ99445 158 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 CCDC77Q9BR77 488 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 GINS2Q9Y248 185 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 USP15Q9Y4E8 981 aaPredicted RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 DGAT1O75907 488 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 VNN1O95497 513 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 FDX1P10109 184 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 MYL6P60660 151 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 BTKQ06187 659 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 OVGP1Q12889 678 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 PDIA2Q13087 525 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 CLUL1Q15846 466 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 SPATA24Q86W54 205 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 ZNF606Q8WXB4 792 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 DRC3Q9H069 523 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 HACL1Q9UJ83 578 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 LZTS1Q9Y250 596 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 KAT6AQ92794 2004 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 GRAP2O75791 330 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 PROSCO94903 275 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 EDN1P05305 212 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 TPBGLP0DKB5 382 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 COL6A2P12110 1019 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 MUTP22033 750 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 TARSP26639 723 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 TBL3Q12788 808 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 TRPC3Q13507 836 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 ACAP1Q15027 740 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 EFTUD2Q15029 972 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH1-214ENST00000621016 CDO1Q16878 200 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms