RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TMCO5BA8MYB1 307 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CLDN5O00501 218 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 PJA2O43164 708 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CCP110O43303 1012 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 ARHGEF15O94989 841 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CXCL14O95715 111 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CA3P07451 260 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 OR4Q2P0C623 313 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 SETSIPP0DME0 302 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CTSAP10619 480 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CCDC130P13994 396 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MMP8P22894 467 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 ADORA2BP29275 332 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CTNNB1P35222 781 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 GLUD2P49448 558 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 VAV2P52735 878 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 GALCP54803 685 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 NOMO3P69849 1222 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CENPCQ03188 943 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TAP1Q03518 808 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 UBE3AQ05086 875 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 PDE4CQ08493 712 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 GPR17Q13304 367 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 RAB30Q15771 203 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 PSMD5Q16401 504 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CCDC142Q17RM4 750 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 GOLGA7BQ2TAP0 167 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 NAA35Q5VZE5 725 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 SLC8B1Q6J4K2 584 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 PRSS55Q6UWB4 352 aaPredicted RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 C4orf50Q6ZRC1 276 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 KIAA1328Q86T90 577 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TTC30AQ86WT1 665 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 ERICH1Q86X53 443 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 SPATA2LQ8IUW3 424 aaPredicted RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TDHQ8IZJ6 230 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MCOLN2Q8IZK6 566 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CCAR2Q8N163 923 aaKnown RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TXLNBQ8N3L3 684 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 STK32AQ8WU08 396 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TGS1Q96RS0 853 aaKnown RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 CLSTN3Q9BQT9 956 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 C17orf80Q9BSJ5 609 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MED10Q9BTT4 135 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 RXFP1Q9HBX9 757 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MRPL17Q9NRX2 175 aaKnown RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 TRMT1Q9NXH9 659 aaKnown RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MSRAQ9UJ68 235 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 YBX2Q9Y2T7 364 aaKnown RBP8.49□□□□□ -1.05
CPNE3-209ENST00000620393 LTBP2Q14767 1821 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 COL4A6Q14031 1691 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 M0QYV0 167 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 TK2O00142 265 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 C2CD2LO14523 706 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ADAM12O43184 909 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 URODP06132 367 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 TMEM253P0C7T8 217 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 FAM200BP0CF97 657 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 MYBL1P10243 752 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 NPR3P17342 541 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 BDNFP23560 247 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 OR1D2P34982 312 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ARHGAP25P42331 645 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 NSFP46459 744 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 GABRB2P47870 512 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 RPL34P49207 117 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 BCAT1P54687 386 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ARPP19P56211 112 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SLC8A3P57103 927 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SNX16P57768 344 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ERVFC1P60507 584 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 GPC5P78333 572 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 KIF5AQ12840 1032 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PTP4A2Q12974 167 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 RAB33AQ14088 237 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 CFAP221Q4G0U5 840 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SLC39A12Q504Y0 691 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PMF1Q6P1K2 205 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ADGRD1Q6QNK2 874 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 TMC7Q7Z402 723 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 TMEM110Q86TL2 294 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 FAM35AQ86V20 835 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 DNAAF5Q86Y56 855 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 MRPL43Q8N983 215 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 C1orf131Q8NDD1 294 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 C2orf15Q8WU43 125 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SECISBP2LQ93073 1101 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 MYLPFQ96A32 169 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 C18orf8Q96DM3 657 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SMARCD1Q96GM5 515 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 FUBP3Q96I24 572 aaKnown RBP eCLIP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 HSFY1Q96LI6 401 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 NOX5Q96PH1 765 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 SMOQ99835 787 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 C11orf84Q9BUA3 381 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms