RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 RELAQ04206 551 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NR1D2Q14995 579 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CMPK2Q5EBM0 449 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DEPDC1Q5TB30 811 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 TMCO4Q5TGY1 634 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DPY19L2P1Q6NXN4 242 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 KLHL35Q6PF15 583 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DDX42Q86XP3 938 aaKnown RBP eCLIP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 THNSL1Q8IYQ7 743 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 IQCKQ8N0W5 287 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 LILRB1Q8NHL6 650 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NAT14Q8WUY8 206 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SLC7A3Q8WY07 619 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CENPTQ96BT3 561 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NDFIP2Q9NV92 336 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DDX18Q9NVP1 670 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DSEQ9UL01 958 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 LRCH1Q9Y2L9 728 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 GIT1Q9Y2X7 761 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 K7ERI5 159 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 AP3B1O00203 1094 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 HGSO14964 777 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NVLO15381 856 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 GJB6O95452 261 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 H2AFZP0C0S5 128 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SUPT20HL2P0C7V6 817 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ZNF286BP0CG31 522 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 HNRNPH3P31942 346 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SFNP31947 248 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ETFBP38117 255 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 TNFSF9P41273 254 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 STAT5BP51692 787 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CLCN3P51790 818 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 MARSP56192 900 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CYLC2Q14093 348 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 KCTD2Q14681 263 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 MESDQ14696 234 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ARL13BQ3SXY8 428 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 C1orf220Q5T0J3 134 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 EMBQ6PCB8 327 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 LBX2Q6XYB7 198 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 H2AFVQ71UI9 128 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PEX26Q7Z412 305 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 VPS36Q86VN1 386 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SPATA4Q8NEY3 305 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SLC35G2Q8TBE7 412 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 BRSK1Q8TDC3 778 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 GIPC2Q8TF65 315 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ERLEC1Q96DZ1 483 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SLC10A4Q96EP9 437 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 C8orf48Q96LL4 319 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SPATA33Q96N06 139 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 FERD3LQ96RJ6 166 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NUDCD1Q96RS6 583 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CENPKQ9BS16 269 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 DDX47Q9H0S4 455 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 NMRK1Q9NWW6 199 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 AIPL1Q9NZN9 384 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 STIM2Q9P246 746 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CNOT8Q9UFF9 292 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SLC12A6Q9UHW9 1150 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 INO80B-WBP1J3KQ70 363 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 SLC16A3O15427 465 aaKnown RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 FTLP02792 175 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 SHBGP04278 402 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 FAM153BP0C7A2 387 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 ITGA4P13612 1032 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 GJA5P36382 358 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PAFAH1B1P43034 410 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 CKAP4Q07065 602 aaKnown RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 STRN3Q13033 797 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 FAM153CQ494X1 144 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PAPD7Q5XG87 772 aaKnown RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PPP1R2P3Q6NXS1 205 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 ABHD15Q6UXT9 468 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 C3orf62Q6ZUJ4 267 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 RFPL4BQ6ZWI9 263 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 TAS1R3Q7RTX0 852 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 TMEM151BQ8IW70 566 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 REM2Q8IYK8 340 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 LILRB2Q8N423 598 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 RNF149Q8NC42 400 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 CCDC110Q8TBZ0 833 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 STK32AQ8WU08 396 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PRPF31Q8WWY3 499 aaKnown RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 CPA5Q8WXQ8 436 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 STARD8Q92502 1023 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 PMM1Q92871 262 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 GPRASP2Q96D09 838 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 SPOCK3Q9BQ16 436 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 ELAC2Q9BQ52 826 aaKnown RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 INO80BQ9C086 356 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 GPR88Q9GZN0 384 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 TMEM206Q9H813 350 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-214ENST00000617767 CLIC5Q9NZA1 410 aa5.82□□□□□ -1.48
CPNE4-214ENST00000617767 SELENONQ9NZV5 590 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms