RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 OTOL1A6NHN0 477 aaPredicted RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 TRDMT1O14717 391 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 TPD52L2O43399 206 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 AKAP3O75969 853 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 GAP43P17677 238 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 PLCG1P19174 1290 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 TYMPP19971 482 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 SYT1P21579 422 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 CDC25CP30307 473 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 LIG4P49917 911 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 PPP2R3AQ06190 1150 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 SMARCB1Q12824 385 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 PSMD2Q13200 908 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 RUNX3Q13761 415 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 BECN1Q14457 450 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 SLC39A14Q15043 492 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 UAP1L1Q3KQV9 507 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 SLC39A12Q504Y0 691 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 DAB2IPQ5VWQ8 1189 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 KIAA1211LQ6NV74 962 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 CCDC73Q6ZRK6 1079 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 ZNF720Q7Z2F6 126 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 RASSF8Q8NHQ8 419 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 RPLP0P6Q8NHW5 317 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 SNX21Q969T3 373 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 CHFRQ96EP1 664 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 BICD1Q96G01 975 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 ZC3H10Q96K80 434 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 SENP8Q96LD8 212 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 FIZ1Q96SL8 496 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 STRA6Q9BX79 667 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 FBRSL1Q9HCM7 1045 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 OLFML3Q9NRN5 406 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 CPSF3Q9UKF6 684 aaKnown RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 CCL26Q9Y258 94 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 LAMA1P25391 3075 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 KIF26AQ9ULI4 1882 aaPredicted RBP9.19□□□□□ -0.94
GPC6-202ENST00000617456 ABCA7Q8IZY2 2146 aa9.19□□□□□ -0.94
GPC6-202ENST00000617456 BCLAF3A2AJT9 711 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 LACTBL1A8MY62 500 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 KIAA0391O15091 583 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 APBB3O95704 486 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 LDHAP00338 332 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 SETSIPP0DME0 302 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ODC1P11926 461 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ATF6P18850 670 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 NMT1P30419 496 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 AVPR1AP37288 418 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 TNFSF9P41273 254 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 GALK1P51570 392 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 DGKEP52429 567 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 SARNPP82979 210 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 CBX1P83916 185 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 BFSP1Q12934 665 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ACAP1Q15027 740 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 KARSQ15046 597 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 SPATA1Q5VX52 437 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 CMTM8Q8IZV2 173 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 MAB21L3Q8N8X9 362 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 STKLD1Q8NE28 680 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 OR10T2Q8NGX3 314 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 AGAP3Q96P47 875 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 FAM83CQ9BQN1 747 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 MSTO1Q9BUK6 570 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ADAM33Q9BZ11 813 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 HAPLN2Q9GZV7 340 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 RASSF4Q9H2L5 321 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 RPF1Q9H9Y2 349 aaKnown RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 SLC24A3Q9HC58 644 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 SUN2Q9UH99 717 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 ZMYM5Q9UJ78 669 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 FBXO2Q9UK22 296 aaPredicted RBP9.18□□□□□ -0.94
GPC6-202ENST00000617456 DSEQ9UL01 958 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
GPC6-202ENST00000617456 LNP1A1A4G5 178 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 ANO9A1A5B4 782 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 FRMD3A2A2Y4 597 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 VPS37CA5D8V6 355 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 K7ENM7 598 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 STX6O43752 255 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 PPP6R2O75170 966 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 PPP1R37O75864 691 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 IL18RAPO95256 599 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 CYP11A1P05108 521 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 DRD1P21728 446 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms