RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TSC2P49815 1807 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 PRR5-ARHGAP8B1AHC4 643 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 ZNF18P17022 549 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 GJA1P17302 382 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 CYP3A5P20815 502 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 TGM1P22735 817 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 VIPR2P41587 438 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 MXI1P50539 228 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 ATXN1P54253 815 aaKnown RBP15.89■□□□□ 0.13
UBXN1-218ENST00000616865 ARHGAP8P85298 464 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 MYL7Q01449 175 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 PPP2R5DQ14738 602 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 VWA3BQ502W6 1294 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 RNF19BQ6ZMZ0 732 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 CCDC150Q8NCX0 1101 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.13
UBXN1-218ENST00000616865 SLC35C1Q96A29 364 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 TRPV4Q9HBA0 871 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 TMEM8AQ9HCN3 771 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 LIMA1Q9UHB6 759 aaKnown RBP15.89■□□□□ 0.13
UBXN1-218ENST00000616865 ITGA11Q9UKX5 1188 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
UBXN1-218ENST00000616865 USP18Q9UMW8 372 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 YIPF1Q9Y548 306 aa15.89■□□□□ 0.13
UBXN1-218ENST00000616865 M0QZQ0 153 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 ARNTLO00327 626 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 ZNF263O14978 683 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 ITGB3P05106 788 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 PIK3CAP42336 1068 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 CCR3P51677 355 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 GUCY2FP51841 1108 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 COPB1P53618 953 aaKnown RBP15.88■□□□□ 0.13
UBXN1-218ENST00000616865 NRLP54845 237 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 CLDN10P78369 228 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 RBP5P82980 135 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 TEAD2Q15562 447 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 KRT39Q6A163 491 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 TRAPPC11Q7Z392 1133 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 MFSD6LQ8IWD5 586 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 LMAN1LQ9HAT1 526 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 PARD6AQ9NPB6 346 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 PTPRJQ12913 1337 aa15.88■□□□□ 0.13
UBXN1-218ENST00000616865 HEPACAM2A8MVW5 462 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 VNN2O95498 520 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 CHRNB1P11230 501 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 LRPAP1P30533 357 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
UBXN1-218ENST00000616865 FMO5P49326 533 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 YWHAHQ04917 246 aaPredicted RBP15.87■□□□□ 0.13
UBXN1-218ENST00000616865 PPP3CAQ08209 521 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 PLD1Q13393 1074 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 ZBTB6Q15916 424 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 C1orf220Q5T0J3 134 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 SV2AQ7L0J3 742 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 SHKBP1Q8TBC3 707 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 ZNF516Q92618 1163 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 E2F7Q96AV8 911 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 MSANTD3Q96H12 275 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 FAM84AQ96KN4 292 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 ZNF560Q96MR9 790 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 GPR88Q9GZN0 384 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 HSD3B7Q9H2F3 369 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 SLITRK6Q9H5Y7 841 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 RAB23Q9ULC3 237 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 NCOR2Q9Y618 2525 aa15.87■□□□□ 0.13
UBXN1-218ENST00000616865 OAZ2O95190 189 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 C4BPAP04003 597 aaKnown RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 TPM3P06753 285 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 OR4Q2P0C623 313 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 AARSP49588 968 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 MLLT6P55198 1093 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 FANCCQ00597 558 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 MYO1EQ12965 1108 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 NCOA4Q13772 614 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 ZACNQ401N2 412 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 LAIR1Q6GTX8 287 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 C1orf127Q8N9H9 656 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 CSGALNACT1Q8TDX6 532 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 RSPRY1Q96DX4 576 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 PCMTD1Q96MG8 357 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 PGLYRP2Q96PD5 576 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 RTKNQ9BST9 563 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 LRRC3Q9BY71 257 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 OXCT2Q9BYC2 517 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 CRISPLD1Q9H336 500 aa15.86■□□□□ 0.13
UBXN1-218ENST00000616865 TIMM13Q9Y5L4 95 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-218ENST00000616865 F5P12259 2224 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 A0A1W2PRU2 124 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 P4HA2O15460 535 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms