RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EFL1Q7Z2Z2 1120 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 KIAA0895Q8NCT3 520 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 RMND5BQ96G75 393 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 FAR2Q96K12 515 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 TRIM62Q9BVG3 475 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 CDV3Q9UKY7 258 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 TULP2O00295 520 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MED24O75448 989 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 RAG1P15918 1043 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 EIF2B2P49770 351 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 KCNJ2P63252 427 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MCL1Q07820 350 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 BTBD8Q5XKL5 378 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 SCFD2Q8WU76 684 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 ECSITQ9BQ95 431 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MROH7Q68CQ1 1323 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 PRR23D1E9PI22 279 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 LZTS3O60299 673 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 PRR23D2P0DMB1 279 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 PEX5P50542 639 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 RPL10AP62906 217 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 FAM83EQ2M2I3 478 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MREGQ8N565 214 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MED15Q96RN5 788 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 TRIM45Q9H8W5 580 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 SYNDIG1LA6NDD5 238 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 ROR2Q01974 943 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 HEATR4Q86WZ0 1026 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 ZNF75CPQ92670 426 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 TUBGCP3Q96CW5 907 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 RIT2Q99578 217 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 DUSP9Q99956 384 aaKnown RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 SH3GL1Q99961 368 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 DCUN1D5Q9BTE7 237 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 MMADHCQ9H3L0 296 aaPredicted RBP19.55■□□□□ 0.72
SPAST-203ENST00000615843 DAPK2Q9UIK4 370 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 ADGRA2Q96PE1 1338 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 TCHHL1Q5QJ38 904 aaPredicted RBP19.54■□□□□ 0.72
SPAST-203ENST00000615843 DENND1BQ6P3S1 775 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 NT5DC3Q86UY8 548 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 TRIM69Q86WT6 500 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 CCNJLQ8IV13 435 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 KYQ8NBH2 561 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 CAB39Q9Y376 341 aaPredicted RBP19.54■□□□□ 0.72
SPAST-203ENST00000615843 MEI4A8MW99 385 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 TBC1D12O60347 775 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 SPOCD1Q6ZMY3 1216 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 DIS3LQ8TF46 1054 aaKnown RBP19.54■□□□□ 0.72
SPAST-203ENST00000615843 SLC5A5Q92911 643 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 DCLK3Q9C098 648 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 NYAP2Q9P242 653 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 LRFN2Q9ULH4 789 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 TGM2P21980 687 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 DCTN2Q13561 401 aaKnown RBP19.54■□□□□ 0.72
SPAST-203ENST00000615843 GIT2Q14161 759 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 ANO4Q32M45 955 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 CNGB3Q9NQW8 809 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 ARMCX1Q9P291 453 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 DAGLAQ9Y4D2 1042 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 HECW2Q9P2P5 1572 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 KANSL1LA0AUZ9 987 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 WBP4O75554 376 aaKnown RBP19.54■□□□□ 0.72
SPAST-203ENST00000615843 UNC5CO95185 931 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 NAPEPLDQ6IQ20 393 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 TMEM245Q9H330 911 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 ACAD9Q9H845 621 aa19.54■□□□□ 0.72
SPAST-203ENST00000615843 IGSF9BQ9UPX0 1349 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 ZBTB24O43167 697 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 RASSF9O75901 435 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 BCL10O95999 233 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CNTFP26441 200 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 STAT5BP51692 787 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CDK16Q00536 496 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 BMPR2Q13873 1038 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 FUT11Q495W5 492 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 KCTD21Q4G0X4 260 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 ZNF483Q8TF39 744 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 TFB1MQ8WVM0 346 aaKnown RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 SPATA17Q96L03 361 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 SHOC2Q9UQ13 582 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 COPG1Q9Y678 874 aaKnown RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 A0A1B0GW55 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 LRRC10BA6NIK2 292 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 ZNF197O14709 1029 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L2P0CJ85 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L3P0CJ86 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L4P0CJ87 422 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L5P0CJ88 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L6P0CJ89 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4L7P0CJ90 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 EMC2Q15006 297 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CEP78Q5JTW2 689 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 KCNT1Q5JUK3 1230 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 IPMKQ8NFU5 416 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 UBA3Q8TBC4 463 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CKAP2Q8WWK9 683 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms