RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RIPOR3Q96MK2 946 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLIRP-212ENST00000613856 SNX25Q9H3E2 840 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 ACP6Q9NPH0 428 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 DNAJB4Q9UDY4 337 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 NRP1O14786 923 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 THAP12O43422 761 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 MED7O43513 233 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 LSM8O95777 96 aaKnown RBP12.13□□□□□ -0.47
SLIRP-212ENST00000613856 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-212ENST00000613856 MMEP08473 750 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 VDRP11473 427 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
SLIRP-212ENST00000613856 CDH5P33151 784 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-212ENST00000613856 LHX1P48742 406 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 SLC11A1P49279 550 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 STILQ15468 1287 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 DUSP6Q16828 381 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 WSCD1Q658N2 575 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
SLIRP-212ENST00000613856 OSTM1Q86WC4 334 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 CRYBG2Q8N1P7 616 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 MICAL1Q8TDZ2 1067 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 TNIP3Q96KP6 325 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 CWH43Q9H720 699 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 MARCH5Q9NX47 278 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 PCDHA13Q9Y5I0 950 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 CACNA1AO00555 2505 aa12.13□□□□□ -0.47
SLIRP-212ENST00000613856 MYH10P35580 1976 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 A8MXQ7 604 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 O00370 1275 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 SYN3O14994 580 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PJA2O43164 708 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 TRAPPC3O43617 180 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ALDH2P05091 517 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ASGR2P07307 311 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 GALTP07902 379 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 CD19P15391 556 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PBX3P40426 434 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 NBL1P41271 181 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 MAGEA1P43355 309 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 BRCC3P46736 316 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 CYP27A1Q02318 531 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 CENPCQ03188 943 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ELAVL2Q12926 359 aaKnown RBP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 CLEC16AQ2KHT3 1053 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PLPP4Q5VZY2 271 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ARHGAP17Q68EM7 881 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 METTL23Q86XA0 190 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 REXO1L1PQ8IX06 675 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 HASPINQ8TF76 798 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 RABGGTAQ92696 567 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 TSGA10Q9BZW7 698 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ISCUQ9H1K1 167 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 SEPT11Q9NVA2 429 aaKnown RBP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
SLIRP-212ENST00000613856 PRG3Q9Y2Y8 225 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-212ENST00000613856 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 GVINP1Q7Z2Y8 2422 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 MED19A0JLT2 244 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 HIDE1A8MVS5 230 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 C2CD4DB7Z1M9 353 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 F8W810 466 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 FSCN2O14926 492 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 RTN2O75298 545 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 FGF18O76093 207 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 EFEMP2O95967 443 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 CALCAP01258 141 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 UNGP13051 313 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 LAG3P18627 525 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 PCSK1P29120 753 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 ARHGAP25P42331 645 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 BCAR1P56945 870 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 NOMO3P69849 1222 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 FOXK2Q01167 660 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms