RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 POU4F1Q01851 419 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 DDX53Q86TM3 631 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 CLCA2Q9UQC9 943 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 TRIM65Q6PJ69 517 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 HPDLQ96IR7 371 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 RNF181Q9P0P0 153 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 SH3BP1Q9Y3L3 701 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 UNC45BQ8IWX7 931 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 ZNF668Q96K58 619 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 RMND5AQ9H871 391 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 AGPAT3Q9NRZ7 376 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 ADGRA3Q8IWK6 1321 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 SEC24CP53992 1094 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 SLC29A2Q14542 456 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 ZCWPW2Q504Y3 356 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 IPMKQ8NFU5 416 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 SLITRK1Q96PX8 696 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 TRIM49D1C9J1S8 452 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 CCDC142Q17RM4 750 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 WNK4Q96J92 1243 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 HIC2Q96JB3 615 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 VPS50Q96JG6 964 aa18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 DRG1Q9Y295 367 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-206ENST00000613459 KBTBD13C9JR72 458 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 PDE5AO76074 875 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 RARBP10826 455 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 ERFP50548 548 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 PPP4CP60510 307 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 ITGA9Q13797 1035 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 LRRC6Q86X45 466 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 INPP5DQ92835 1189 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 GPR63Q9BZJ6 419 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 PHTF1Q9UMS5 762 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 CHD1O14646 1710 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 RARGP13631 454 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 RAB14P61106 215 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 LRRC34Q8IZ02 419 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 GPR75-ASB3A0A0A6YYF3 556 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 VDRP11473 427 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 PACS2Q86VP3 889 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 TRPC7Q9HCX4 862 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 SLC24A2Q9UI40 661 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 AFF2P51816 1311 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 LSM8O95777 96 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 ODC1P11926 461 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 IMPDH2P12268 514 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 NCKAP1LP55160 1127 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 TMC2Q8TDI7 906 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 EPS8L2Q9H6S3 715 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 EFCAB1Q9HAE3 211 aa18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 TRMT6Q9UJA5 497 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-206ENST00000613459 CAND2O75155 1236 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 TARSP26639 723 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CACNB2Q08289 660 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 RCN1Q15293 331 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 DGKDQ16760 1214 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 DCAF6Q58WW2 860 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 MICU2Q8IYU8 434 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 JADE3Q92613 823 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 ZNF512Q96ME7 567 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 SOX6P35712 828 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 LRRC74AQ0VAA2 488 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CCDC60Q8IWA6 550 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 EPB41L4AQ9HCS5 686 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 EXOSC4Q9NPD3 245 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 NAGPAQ9UK23 515 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 SLC39A10Q9ULF5 831 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 MTA1Q13330 715 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CCDC103Q8IW40 242 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 FAM71DQ8N9W8 422 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 RIN3Q8TB24 985 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CAAP1Q9H8G2 361 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 TOMM70O94826 608 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 DLGAP3O95886 979 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 FCGR1AP12314 374 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 TCN1P20061 433 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CPT1AP50416 773 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 ZC2HC1CQ53FD0 456 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 EFCAB12Q6NXP0 572 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 ZFP42Q96MM3 310 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 ECSITQ9BQ95 431 aa18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 CINPQ9BW66 212 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 MRPS26Q9BYN8 205 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-206ENST00000613459 C2orf81A6NN90 581 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 GRK2P25098 689 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 PPP3CCP48454 512 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 GJC2Q5T442 439 aaPredicted RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CHSY1Q86X52 802 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CASKIN2Q8WXE0 1202 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 TMBIM4Q9HC24 238 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 FBXO21O94952 628 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 GUCA1CO95843 209 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 PDGFRBP09619 1106 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms