RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
PRKN-210ENST00000612540 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRKN-210ENST00000612540 KRT82Q9NSB4 513 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 SSX2IPQ9Y2D8 614 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 BACE2Q9Y5Z0 518 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 A0A087X0T9 212 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 AP1G2O75843 785 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 NDUFA10O95299 355 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 CXCL14O95715 111 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 FAM228BP0C875 321 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 FAM200BP0CF97 657 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 BMP1P13497 986 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 BCAT1P54687 386 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 SLC8A3P57103 927 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 ROR1Q01973 937 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 TFF2Q03403 129 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 SLC18A3Q16572 532 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 CLEC16AQ2KHT3 1053 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 CCDC122Q5T0U0 273 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 FAM171BQ6P995 826 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 RSPO2Q6UXX9 243 aaPredicted RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 PALB2Q86YC2 1186 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 FUKQ8N0W3 1084 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 TMEM35BQ8NCS4 154 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 C1orf131Q8NDD1 294 aaKnown RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 ACRBPQ8NEB7 543 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 PCDHB18PQ96TA0 734 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 HNRNPABQ99729 332 aaKnown RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 SYT11Q9BT88 431 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 RHOBTB2Q9BYZ6 727 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
PRKN-210ENST00000612540 EPN1Q9Y6I3 576 aaPredicted RBP13.58□□□□□ -0.24
PRKN-210ENST00000612540 ADAM12O43184 909 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 LSM8O95777 96 aaKnown RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 COL9A1P20849 921 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 BDNFP23560 247 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 DNAJB1P25685 340 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 NSFP46459 744 aaKnown RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 ERVFC1P60507 584 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 NOMO3P69849 1222 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 BST2Q10589 180 aaKnown RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 ALKBH5Q6P6C2 394 aaKnown RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 TOGARAM2Q6ZUX3 1019 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 TTC30AQ86WT1 665 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 SCN4BQ8IWT1 228 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 SMARCD1Q96GM5 515 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 NECAB3Q96P71 396 aaPredicted RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 NOX5Q96PH1 765 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 PKMYT1Q99640 499 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 CLSTN3Q9BQT9 956 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 EMILIN2Q9BXX0 1053 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 SYNCQ9H7C4 482 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
PRKN-210ENST00000612540 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
PRKN-210ENST00000612540 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 MTMR11A4FU01 709 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 EIF3CLB5ME19 914 aaKnown RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 H3BNC9 293 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 TEX28O15482 410 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 TBC1D4O60343 1298 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 SETSIPP0DME0 302 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 NPR3P17342 541 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 RGS7P49802 495 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 NDUFV1P49821 464 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 KCNQ1P51787 676 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 MAP3K7CLP57077 242 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 PDE4CQ08493 712 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 GPR17Q13304 367 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 AAK1Q2M2I8 961 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 ASTE1Q2TB18 679 aaPredicted RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 SLC8B1Q6J4K2 584 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 DNAAF5Q86Y56 855 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 GPR65Q8IYL9 337 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 MSANTD4Q8NCY6 345 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 IPO4Q8TEX9 1081 aaKnown RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 EIF3CQ99613 913 aaKnown RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 C11orf70Q9BRQ4 267 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
PRKN-210ENST00000612540 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
PRKN-210ENST00000612540 TAS2R14Q9NYV8 317 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms