RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 MAB21L3Q8N8X9 362 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 ENGASEQ8NFI3 743 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 FAM3CQ92520 227 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 USP13Q92995 863 aaPredicted RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 C8orf48Q96LL4 319 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 SMYD3Q9H7B4 428 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 KIF9Q9HAQ2 790 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 SPATA6Q9NWH7 488 aaPredicted RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 MAPK8IP1Q9UQF2 711 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 MYO15AQ9UKN7 3530 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 TRIM66O15016 1216 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 GRIK1P39086 918 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 PNOCQ13519 176 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
SNX20-205ENST00000610485 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 TAF4BQ92750 862 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 NKD2Q969F2 451 aaPredicted RBP13.74□□□□□ -0.21
SNX20-205ENST00000610485 TTLL2Q9BWV7 592 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 SDCBP2Q9H190 292 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 TDP1Q9NUW8 608 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 THG1LQ9NWX6 298 aaKnown RBP13.74□□□□□ -0.21
SNX20-205ENST00000610485 FBXO4Q9UKT5 387 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 NDRG2Q9UN36 371 aaKnown RBP13.74□□□□□ -0.21
SNX20-205ENST00000610485 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
SNX20-205ENST00000610485 USP34Q70CQ2 3546 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 F8VP50 259 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 LAMTOR5O43504 91 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 CCNE1P24864 410 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 ANXA13P27216 316 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 CTHP32929 405 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 RAP1GAPP47736 663 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 SOX9P48436 509 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 VAMP7P51809 220 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 KPNA1P52294 538 aaPredicted RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 CACNA2D1P54289 1103 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 CDH8P55286 799 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 MCCD1P59942 119 aaPredicted RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 NOP14P78316 857 aaKnown RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 FAM160A1Q05DH4 1040 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 EDRF1Q3B7T1 1238 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 COBLL1Q53SF7 1204 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 DENND5BQ6ZUT9 1274 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 RALGPS2Q86X27 583 aaPredicted RBP13.73□□□□□ -0.21
SNX20-205ENST00000610485 FAM186BQ8IYM0 893 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 RIN3Q8TB24 985 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 ELMO3Q96BJ8 720 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 IER2Q9BTL4 223 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 B3GNT5Q9BYG0 378 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 CHRDQ9H2X0 955 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 TMEM30AQ9NV96 361 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 RMND1Q9NWS8 449 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 GTSE1Q9NYZ3 720 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 EHD2Q9NZN4 543 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 GCNT4Q9P109 453 aa13.73□□□□□ -0.21
SNX20-205ENST00000610485 PIEZO1Q92508 2521 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TICRRQ7Z2Z1 1910 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TRAV19A0A0A6YYK7 116 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 CHRNB1P11230 501 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 P4HA1P13674 534 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 PSMC2P35998 433 aaKnown RBP13.72□□□□□ -0.21
SNX20-205ENST00000610485 PIK3CAP42336 1068 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 USP46P62068 366 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TNK2Q07912 1038 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 MTAPQ13126 283 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 ADAM9Q13443 819 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 SCARA5Q6ZMJ2 495 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 MAMSTRQ6ZN01 415 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
SNX20-205ENST00000610485 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 TIGD1Q96MW7 591 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 GSDMAQ96QA5 445 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 SEMA4AQ9H3S1 761 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 LMAN1LQ9HAT1 526 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 PRMT8Q9NR22 394 aaPredicted RBP13.72□□□□□ -0.21
SNX20-205ENST00000610485 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 R4GN57 208 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
SNX20-205ENST00000610485 KIF26AQ9ULI4 1882 aaPredicted RBP13.72□□□□□ -0.21
SNX20-205ENST00000610485 PATJQ8NI35 1801 aa13.71□□□□□ -0.21
SNX20-205ENST00000610485 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.21
SNX20-205ENST00000610485 C2orf78A6NCI8 922 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms