RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 MORF4L1Q9UBU8 362 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 NR2E3Q9Y5X4 410 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 PLXNB2O15031 1838 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 hCG_1818297A0A087WSY0 165 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 A8MXQ7 604 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 TJP3O95049 919 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 LCP1P13796 627 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 AFF1P51825 1210 aaKnown RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 CCNG2Q16589 344 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 PPP6R3Q5H9R7 873 aaPredicted RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 RCOR2Q8IZ40 523 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 PEBP4Q96S96 227 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 CCT8L2Q96SF2 557 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSA-214ENST00000606788 SIP14410 1827 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 EBAG9O00559 213 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 PGK1P00558 417 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 RARGP13631 454 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 CDKN2BP42772 138 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 PTK6Q13882 451 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 MFSD10Q14728 455 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 TFDP3Q5H9I0 405 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 RBM41Q96IZ5 413 aaKnown RBP16.71■□□□□ 0.27
CTSA-214ENST00000606788 RBM15Q96T37 977 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTSA-214ENST00000606788 ASB7Q9H672 318 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 BARX2Q9UMQ3 279 aaPredicted RBP16.71■□□□□ 0.27
CTSA-214ENST00000606788 PCDHGC3Q9UN70 934 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 PPME1Q9Y570 386 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
CTSA-214ENST00000606788 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 RARBP10826 455 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 CDH6P55285 790 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 PIGHQ14442 188 aaPredicted RBP16.71■□□□□ 0.27
CTSA-214ENST00000606788 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
CTSA-214ENST00000606788 HOOK3Q86VS8 718 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 NLRP14Q86W24 1093 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 TTC30AQ86WT1 665 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 GRK7Q8WTQ7 553 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 ADAMTS10Q9H324 1103 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 NINJ2Q9NZG7 142 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 ANK1P16157 1881 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 CITO14578 2027 aa16.71■□□□□ 0.27
CTSA-214ENST00000606788 SIGLEC16A6NMB1 481 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 SPTLC1O15269 473 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 FAXCQ5TGI0 409 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 CYP4X1Q8N118 509 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 FAM71DQ8N9W8 422 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 GDAP1Q8TB36 358 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 SLC12A6Q9UHW9 1150 aa16.71■□□□□ 0.26
CTSA-214ENST00000606788 MYO1CO00159 1063 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 GPR32O75388 356 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 RNF8O76064 485 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 P4HA1P13674 534 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 AUHQ13825 339 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 SMAD1Q15797 465 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 PAN2Q504Q3 1202 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 TWF2Q6IBS0 349 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 SRLQ86TD4 932 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 KCNN1Q92952 543 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 ITIH2P19823 946 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 SLC25A11Q02978 314 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 MYO1EQ12965 1108 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 SLMAPQ14BN4 828 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 SLC27A1Q6PCB7 646 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 CTU1Q7Z7A3 348 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
CTSA-214ENST00000606788 MAIP1Q8WWC4 291 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 STRIP2Q9ULQ0 834 aa16.7■□□□□ 0.26
CTSA-214ENST00000606788 LIG3P49916 1009 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 MAP2K5Q13163 448 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 FAM187BQ17R55 369 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 ANKRD22Q5VYY1 191 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTSA-214ENST00000606788 UNC45BQ8IWX7 931 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 LPPQ93052 612 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 OSBPL7Q9BZF2 842 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 EPN3Q9H201 632 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 WHRNQ9P202 907 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 RBM47A0AV96 593 aaKnown RBP16.69■□□□□ 0.26
CTSA-214ENST00000606788 CLDN5O00501 218 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 FGFR1P11362 822 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms