RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 METTL5Q9NRN9 209 aaKnown RBP22.75■■□□□ 1.23
USP6NL-204ENST00000606752 CDH9Q9ULB4 789 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 USTQ9Y2C2 406 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 TDRD15B5MCY1 1934 aaKnown RBP22.74■■□□□ 1.23
USP6NL-204ENST00000606752 I3L4J1 428 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 PSTPIP1O43586 416 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 TUBBP07437 444 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 H2AFXP16104 143 aaPredicted RBP22.74■■□□□ 1.23
USP6NL-204ENST00000606752 TKTP29401 623 aaKnown RBP22.74■■□□□ 1.23
USP6NL-204ENST00000606752 CYP2C18P33260 490 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 LONRF2Q1L5Z9 754 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 FAM102AQ5T9C2 384 aaPredicted RBP22.74■■□□□ 1.23
USP6NL-204ENST00000606752 SEL1L2Q5TEA6 688 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 HASPINQ8TF76 798 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 FAM193BQ96PV7 902 aaPredicted RBP22.74■■□□□ 1.23
USP6NL-204ENST00000606752 TBX21Q9UL17 535 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 LRFN2Q9ULH4 789 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 ATP11BQ9Y2G3 1177 aa22.74■■□□□ 1.23
USP6NL-204ENST00000606752 F8VP50 259 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 KRIT1O00522 736 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 B4GALT3O60512 393 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 RPL34P49207 117 aaKnown RBP22.73■■□□□ 1.23
USP6NL-204ENST00000606752 TAS2R40P59535 323 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 MDH1BQ5I0G3 518 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 CC2D1AQ6P1N0 951 aaPredicted RBP22.73■■□□□ 1.23
USP6NL-204ENST00000606752 FAM183BPQ6ZVS7 135 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 ZDHHC17Q8IUH5 632 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 HSFY1Q96LI6 401 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 AP1M1Q9BXS5 423 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 DUSP16Q9BY84 665 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 CRTAC1Q9NQ79 661 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
USP6NL-204ENST00000606752 CCDC188H7C350 402 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 TMEM189-UBE2V1I3L0A0 370 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 PIK3R2O00459 728 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 ITGB1P05556 798 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 PSMA2P25787 234 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 ACADSBP45954 432 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 SLC8A3P57103 927 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 PLCB3Q01970 1234 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 GLE1Q53GS7 698 aaKnown RBP22.73■■□□□ 1.23
USP6NL-204ENST00000606752 DAB2IPQ5VWQ8 1189 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 FBXO38Q6PIJ6 1188 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 PAQR9Q6ZVX9 377 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 CRIPAKQ8N1N5 446 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 ACBD6Q9BR61 282 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 TMEM39AQ9NV64 488 aa22.73■■□□□ 1.23
USP6NL-204ENST00000606752 RNF216Q9NWF9 866 aaPredicted RBP22.73■■□□□ 1.23
USP6NL-204ENST00000606752 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.72■■□□□ 1.23
USP6NL-204ENST00000606752 HOXA2O43364 376 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 GABBR2O75899 941 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 TYMPP19971 482 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 SSR1P43307 286 aaKnown RBP22.72■■□□□ 1.23
USP6NL-204ENST00000606752 PLA2G4AP47712 749 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 LRRC38Q5VT99 294 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 AADACL2Q6P093 401 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 CASD1Q96PB1 797 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 PNKPQ96T60 521 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 LRRC1Q9BTT6 524 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 C11orf49Q9H6J7 331 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 ARGLU1Q9NWB6 273 aaPredicted RBP22.72■■□□□ 1.23
USP6NL-204ENST00000606752 RAB21Q9UL25 225 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 TET1Q8NFU7 2136 aa22.72■■□□□ 1.23
USP6NL-204ENST00000606752 CLDN5O00501 218 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 XPO1O14980 1071 aaKnown RBP22.71■■□□□ 1.23
USP6NL-204ENST00000606752 OR1G1P47890 313 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 SLC6A3Q01959 620 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 ACAP1Q15027 740 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 CCDC142Q17RM4 750 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 OLFML1Q6UWY5 402 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 DEFB128Q7Z7B8 93 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 SCUBE3Q8IX30 993 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 EMC1Q8N766 993 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 MYCBPAPQ8TBZ2 947 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 PAWRQ96IZ0 340 aaKnown RBP22.71■■□□□ 1.23
USP6NL-204ENST00000606752 RTP3Q9BQQ7 232 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 MED10Q9BTT4 135 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 B3GNT5Q9BYG0 378 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 MYBPHLA2RUH7 354 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 F8W810 466 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 PAPSS1O43252 624 aaPredicted RBP22.71■■□□□ 1.23
USP6NL-204ENST00000606752 NPR3P17342 541 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 C8orf74Q6P047 294 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 KATNAL2Q8IYT4 538 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 KRT12Q99456 494 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 PCDHB8Q9UN66 801 aa22.71■■□□□ 1.23
USP6NL-204ENST00000606752 CLTBP09497 229 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
USP6NL-204ENST00000606752 OVOS1Q6IE37 1185 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 WDR93Q6P2C0 686 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 THEM5Q8N1Q8 247 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 PCED1BQ96HM7 432 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 DNAJB4Q9UDY4 337 aa22.7■■□□□ 1.22
USP6NL-204ENST00000606752 FAM200BP0CF97 657 aa22.69■■□□□ 1.22
USP6NL-204ENST00000606752 SCNN1AP37088 669 aa22.69■■□□□ 1.22
USP6NL-204ENST00000606752 ZNF143P52747 638 aaPredicted RBP22.69■■□□□ 1.22
USP6NL-204ENST00000606752 RBM10P98175 930 aaKnown RBP22.69■■□□□ 1.22
USP6NL-204ENST00000606752 PIGZQ86VD9 579 aa22.69■■□□□ 1.22
USP6NL-204ENST00000606752 SLC13A5Q86YT5 568 aaPredicted RBP22.69■■□□□ 1.22
USP6NL-204ENST00000606752 NPAS4Q8IUM7 802 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms