RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 BEST1O76090 585 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 MICAL2O94851 1124 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 GLP2RO95838 553 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SERPING1P05155 500 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 FAM200BP0CF97 657 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 ATF2P15336 505 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 HNRNPH3P31942 346 aaKnown RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 PRKCIP41743 596 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 GPR15P49685 360 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 MAP3K7CLP57077 242 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 BPIFB4P59827 614 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 FMO1Q01740 532 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 CDR2Q01850 454 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 KLHL30Q0D2K2 578 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 CNGA2Q16280 664 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 MGAT5BQ3V5L5 792 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 LCLAT1Q6UWP7 414 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 CLEC20AQ6ZU45 233 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 ZNF571Q7Z3V5 609 aaPredicted RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 FMNL3Q8IVF7 1028 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SCN4BQ8IWT1 228 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 KREMEN2Q8NCW0 462 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 OR8K1Q8NGG5 319 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 UBA3Q8TBC4 463 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SPPL2BQ8TCT7 592 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 GPR152Q8TDT2 470 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 C2orf15Q8WU43 125 aaKnown RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 SLC22A17Q8WUG5 538 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 SYN2Q92777 582 aaPredicted RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 SMARCD1Q96GM5 515 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 FUBP3Q96I24 572 aaKnown RBP eCLIP8.14□□□□□ -1.11
MSH6-211ENST00000606499 PDLIM2Q96JY6 352 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 GUCD1Q96NT3 240 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 KCNK16Q96T55 309 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 CDX2Q99626 313 aaPredicted RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 HNRNPABQ99729 332 aaKnown RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 SMOQ99835 787 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SYT11Q9BT88 431 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 NUCKS1Q9H1E3 243 aaKnown RBP8.14□□□□□ -1.11
MSH6-211ENST00000606499 IGFLR1Q9H665 355 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 HAUS4Q9H6D7 363 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 CYP4F11Q9HBI6 524 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 MAN1C1Q9NR34 630 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 ARHGAP20Q9P2F6 1191 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 HESX1Q9UBX0 185 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 FBXW11Q9UKB1 542 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 YIPF1Q9Y548 306 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 INSL5Q9Y5Q6 135 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 F8VP50 259 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 MED7O43513 233 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 RFPL2O75678 378 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 C8AP07357 584 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 CCDC172P0C7W6 258 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 HAPLN1P10915 354 aaPredicted RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 NPR3P17342 541 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 ATF6P18850 670 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 POU3F3P20264 500 aaPredicted RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 MAGEA11P43364 429 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 BCAT1P54687 386 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 NOMO3P69849 1222 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 PDE4CQ08493 712 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 BST2Q10589 180 aaKnown RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 SMARCB1Q12824 385 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 KCNC3Q14003 757 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 STILQ15468 1287 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 MEA1Q16626 185 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 DDR2Q16832 855 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 PKDCCQ504Y2 493 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 LIN9Q5TKA1 542 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 SDHAF4Q5VUM1 108 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 GPRIN1Q7Z2K8 1008 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 CCDC186Q7Z3E2 898 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 ZNF677Q86XU0 584 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 TCEAL8Q8IYN2 117 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 ANKRD52Q8NB46 1076 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 C1orf131Q8NDD1 294 aaKnown RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 ZMIZ2Q8NF64 920 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 FEZF2Q8TBJ5 459 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 SECISBP2LQ93073 1101 aaKnown RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 PPP2R3CQ969Q6 453 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 PANX2Q96RD6 677 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 CHP1Q99653 195 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 AGPAT1Q99943 283 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 DUSP16Q9BY84 665 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 PDCL3Q9H2J4 239 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 CSNK1G1Q9HCP0 422 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 DMAP1Q9NPF5 467 aaPredicted RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 SEPT11Q9NVA2 429 aaKnown RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 ZNHIT6Q9NWK9 470 aaKnown RBP8.13□□□□□ -1.11
MSH6-211ENST00000606499 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 CYTH4Q9UIA0 394 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
MSH6-211ENST00000606499 ZNF638Q14966 1978 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms