RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 NUP210Q8TEM1 1887 aaPredicted RBP11.39□□□□□ -0.59
TUBE1-210ENST00000604967 TRMT2BQ96GJ1 504 aaKnown RBP11.39□□□□□ -0.59
TUBE1-210ENST00000604967 FUBP3Q96I24 572 aaKnown RBP eCLIP11.39□□□□□ -0.59
TUBE1-210ENST00000604967 KCNK16Q96T55 309 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
TUBE1-210ENST00000604967 BCO2Q9BYV7 579 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 SLITRK6Q9H5Y7 841 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 TASP1Q9H6P5 420 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 LTB4R2Q9NPC1 389 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
TUBE1-210ENST00000604967 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 IKBKBO14920 756 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 PHACTR2O75167 634 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 CCDC130P13994 396 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 WEE1P30291 646 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 TNNC1P63316 161 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 CYP27A1Q02318 531 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 GAS6Q14393 721 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 TRIM68Q6AZZ1 485 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 ACOT1Q86TX2 421 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 CMTM8Q8IZV2 173 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 FUKQ8N0W3 1084 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 C12orf29Q8N999 325 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 B3GALNT2Q8NCR0 500 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
TUBE1-210ENST00000604967 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 ARID3AQ99856 593 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 SNX25Q9H3E2 840 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 GTSE1Q9NYZ3 720 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
TUBE1-210ENST00000604967 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
TUBE1-210ENST00000604967 SIT1Q9Y3P8 196 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 ANAPC1Q9H1A4 1944 aa11.38□□□□□ -0.59
TUBE1-210ENST00000604967 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 FAM170BA6NMN3 283 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 A8MXQ7 604 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 BIN1O00499 593 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 FAM163BP0C2L3 166 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 CSH1P0DML2 217 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 CSH2P0DML3 217 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 CDC25CP30307 473 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 PSMC2P35998 433 aaKnown RBP11.37□□□□□ -0.59
TUBE1-210ENST00000604967 NDST1P52848 882 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 PTPN5P54829 565 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 RPL10AP62906 217 aaKnown RBP11.37□□□□□ -0.59
TUBE1-210ENST00000604967 PRKCQQ04759 706 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 MORC3Q14149 939 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 ANGPT1Q15389 498 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 ZNF667Q5HYK9 610 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 TTI2Q6NXR4 508 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 MON1AQ86VX9 555 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
TUBE1-210ENST00000604967 SCAMP5Q8TAC9 235 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 DNASE1L2Q92874 299 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 TATDN2Q93075 761 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 SMARCE1Q969G3 411 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 WBP2Q969T9 261 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 CLDN23Q96B33 292 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 SPATA17Q96L03 361 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 SMOQ99835 787 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 FAM83CQ9BQN1 747 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 TTLL2Q9BWV7 592 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 ELOVL4Q9GZR5 314 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 RNF38Q9H0F5 515 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 MMRN2Q9H8L6 949 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 TRPV5Q9NQA5 729 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 FRMD4BQ9Y2L6 1034 aa11.37□□□□□ -0.59
TUBE1-210ENST00000604967 CFAP54Q96N23 3096 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 HHLA1C9JL84 531 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 STK25O00506 426 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 CHADO15335 359 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 ARSAP15289 507 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 CCNE1P24864 410 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 GRIK1P39086 918 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 PIK3CAP42336 1068 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 MRE11P49959 708 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 AP3M2P53677 418 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
TUBE1-210ENST00000604967 INCA1Q0VD86 236 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 UBXN2BQ14CS0 331 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 VSTM1Q6UX27 236 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 C4orf50Q6ZRC1 276 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
TUBE1-210ENST00000604967 GPRIN1Q7Z2K8 1008 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 CRYBG2Q8N1P7 616 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 ARL14EPQ8N8R7 260 aaPredicted RBP11.36□□□□□ -0.59
TUBE1-210ENST00000604967 DEPDC1BQ8WUY9 529 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 SLC35C1Q96A29 364 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 C8orf48Q96LL4 319 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 GPR88Q9GZN0 384 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 FBRSL1Q9HCM7 1045 aaKnown RBP11.36□□□□□ -0.59
TUBE1-210ENST00000604967 TMEM8AQ9HCN3 771 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms