RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPS28-204ENST00000602140 RNF40O75150 1001 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 PPP6R2O75170 966 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 BDNFP23560 247 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 GJA4P35212 333 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 ASIC1P78348 528 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 AMPD3Q01432 767 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 ZNF77Q15935 545 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 CSRP2Q16527 193 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 NAIF1Q69YI7 327 aaPredicted RBP14.08□□□□□ -0.16
RPS28-204ENST00000602140 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 CPA6Q8N4T0 437 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 ARL14EPQ8N8R7 260 aaPredicted RBP14.08□□□□□ -0.16
RPS28-204ENST00000602140 RDH13Q8NBN7 331 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 NETO1Q8TDF5 533 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 OSCP1Q8WVF1 389 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 MYLPFQ96A32 169 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 MMS19Q96T76 1030 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 P2RY13Q9BPV8 354 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 KIAA1586Q9HCI6 787 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 CRTAC1Q9NQ79 661 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 POLR3BQ9NW08 1133 aaPredicted RBP14.08□□□□□ -0.16
RPS28-204ENST00000602140 DUS2Q9NX74 493 aaKnown RBP14.08□□□□□ -0.16
RPS28-204ENST00000602140 SLC8A2Q9UPR5 921 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 WNT6Q9Y6F9 365 aa14.08□□□□□ -0.16
RPS28-204ENST00000602140 ZNF638Q14966 1978 aaKnown RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 TGFB1I1O43294 461 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 DLATP10515 647 aaKnown RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 HDCP19113 662 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 DRD1P21728 446 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 WARSP23381 471 aaKnown RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 GRIK1P39086 918 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 IFNAR2P48551 515 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 USP4Q13107 963 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 MAPRE1Q15691 268 aaKnown RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 FAM26FQ5R3K3 315 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 SHC4Q6S5L8 630 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 EPM2AIP1Q7L775 607 aaPredicted RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 TRAPPC11Q7Z392 1133 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 ZNF507Q8TCN5 953 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 SH3RF2Q8TEC5 729 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 GAB3Q8WWW8 586 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
RPS28-204ENST00000602140 AGPAT3Q9NRZ7 376 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 GCNT4Q9P109 453 aa14.07□□□□□ -0.16
RPS28-204ENST00000602140 CCDC163A0A0D9SF12 145 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 SLC30A4O14863 429 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 AXIN1O15169 862 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 CLIC2O15247 247 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 GDF9O60383 454 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 CUTAO60888 179 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
RPS28-204ENST00000602140 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
RPS28-204ENST00000602140 TNNI1P19237 187 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 ANXA13P27216 316 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 CYP2J2P51589 502 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 USP46P62068 366 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 KCNB1Q14721 858 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 EML3Q32P44 896 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 FBXO43Q4G163 708 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 FOXD4L5Q5VV16 416 aaPredicted RBP14.06□□□□□ -0.16
RPS28-204ENST00000602140 CNNM4Q6P4Q7 775 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 NELFCDQ8IXH7 590 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 FOXD4L4Q8WXT5 416 aaPredicted RBP14.06□□□□□ -0.16
RPS28-204ENST00000602140 CD101Q93033 1021 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 ATP2A3Q93084 1043 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 EXOC4Q96A65 974 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 CCDC127Q96BQ5 260 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 PCED1BQ96HM7 432 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 FNBP1Q96RU3 617 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 MRPL45Q9BRJ2 306 aaKnown RBP14.06□□□□□ -0.16
RPS28-204ENST00000602140 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
RPS28-204ENST00000602140 YEATS4O95619 227 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CCDC192P0DO97 292 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CASP1P29466 404 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 GNL1P36915 607 aaPredicted RBP14.05□□□□□ -0.16
RPS28-204ENST00000602140 PDE6CP51160 858 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 NR1H3Q13133 447 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 PSMD6Q15008 389 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CCDC6Q16204 474 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 FOXD4L6Q3SYB3 417 aaPredicted RBP14.05□□□□□ -0.16
RPS28-204ENST00000602140 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 FOXD4L3Q6VB84 417 aaPredicted RBP14.05□□□□□ -0.16
RPS28-204ENST00000602140 DENND5BQ6ZUT9 1274 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 HS2ST1Q7LGA3 356 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CACNA2D4Q7Z3S7 1137 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 KBTBD6Q86V97 674 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CAMKK1Q8N5S9 505 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 XXYLT1Q8NBI6 393 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms