RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TTC28Q96AY4 2481 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 SYCE3A1L190 88 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 BEST1O76090 585 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 MICAL2O94851 1124 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 PRKCSHP14314 528 aaPredicted RBP21.32■■□□□ 1
SSBP4-210ENST00000601444 SLC9A1P19634 815 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 USP46P62068 366 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 MAN2A1Q16706 1144 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 VWA3BQ502W6 1294 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 CDKAL1Q5VV42 579 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 TMEM150AQ86TG1 271 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 LEMD2Q8NC56 503 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 FGF14Q92915 247 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 CYFIP2Q96F07 1278 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 TMEM176AQ96HP8 235 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 ATXN3LQ9H3M9 355 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 GCNT4Q9P109 453 aa21.32■■□□□ 1
SSBP4-210ENST00000601444 ANHXE9PGG2 379 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 PI4K2BG5E9Z4 385 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 DCXO43602 365 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 NOL4O94818 638 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 CSH1P0DML2 217 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 CSH2P0DML3 217 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 PTMSP20962 102 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 ACO1P21399 889 aaKnown RBP21.31■■□□□ 1
SSBP4-210ENST00000601444 ADORA2BP29275 332 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 CYP4F8P98187 520 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 HTR4Q13639 388 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 NCAPHQ15003 741 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 PTPN21Q16825 1174 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 GJB7Q6PEY0 223 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 GPIHBP1Q8IV16 184 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 SPATA17Q96L03 361 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 C8orf48Q96LL4 319 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 HEXIM2Q96MH2 286 aaKnown RBP21.31■■□□□ 1
SSBP4-210ENST00000601444 FUCA2Q9BTY2 467 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 NDST4Q9H3R1 872 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 KRT82Q9NSB4 513 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 ZFP37Q9Y6Q3 630 aaPredicted RBP21.31■■□□□ 1
SSBP4-210ENST00000601444 NUMBLQ9Y6R0 609 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 BDP1A6H8Y1 2624 aa21.31■■□□□ 1
SSBP4-210ENST00000601444 RNF225M0QZC1 329 aaPredicted RBP21.3■■□□□ 1
SSBP4-210ENST00000601444 TRIM66O15016 1216 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 AP1G2O75843 785 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 F11P03951 625 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 TBXAS1P24557 533 aaPredicted RBP21.3■■□□□ 1
SSBP4-210ENST00000601444 ANXA13P27216 316 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 MYL5Q02045 173 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 FAM78AQ5JUQ0 283 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 PPP1R26Q5T8A7 1209 aaPredicted RBP21.3■■□□□ 1
SSBP4-210ENST00000601444 ZMIZ2Q8NF64 920 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 KREMEN1Q96MU8 473 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 HNRNPABQ99729 332 aaKnown RBP21.3■■□□□ 1
SSBP4-210ENST00000601444 SMOQ99835 787 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 TAB2Q9NYJ8 693 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 GDE1Q9NZC3 331 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 DOCK8Q8NF50 2099 aa21.3■■□□□ 1
SSBP4-210ENST00000601444 PTPRDP23468 1912 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 TADA3O75528 432 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 CALCAP01258 141 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 EEF1GP26641 437 aaKnown RBP21.29■■□□□ 1
SSBP4-210ENST00000601444 PON1P27169 355 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 MAP3K7CLP57077 242 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 TRIM65Q6PJ69 517 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 GBP6Q6ZN66 633 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 DENND5BQ6ZUT9 1274 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 SLC44A3Q8N4M1 653 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 TTC39CQ8N584 583 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 AOPEPQ8N6M6 819 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 SMARCD1Q96GM5 515 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 MYRFLQ96LU7 910 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 KXD1Q9BQD3 176 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 PLA2G2FQ9BZM2 168 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 HSD3B7Q9H2F3 369 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
SSBP4-210ENST00000601444 IGSF9Q9P2J2 1179 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 SORCS3Q9UPU3 1222 aa21.29■■□□□ 1
SSBP4-210ENST00000601444 NARSO43776 548 aaKnown RBP21.28■■□□□ 1
SSBP4-210ENST00000601444 FGF19O95750 216 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 ZXDAP98168 799 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 GCNT1Q02742 428 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 KRT31Q15323 416 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 EXOC3L4Q17RC7 722 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 GPR158Q5T848 1215 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 TANGO2Q6ICL3 276 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 TMEM270Q6UE05 265 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 TRMT2BQ96GJ1 504 aaKnown RBP21.28■■□□□ 1
SSBP4-210ENST00000601444 ASB16Q96NS5 453 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 VPS16Q9H269 839 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 SLITRK6Q9H5Y7 841 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 FAM124BQ9H5Z6 455 aaPredicted RBP21.28■■□□□ 1
SSBP4-210ENST00000601444 DMAP1Q9NPF5 467 aaPredicted RBP21.28■■□□□ 1
SSBP4-210ENST00000601444 PCDHB4Q9Y5E5 795 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 ATP8B3O60423 1300 aa21.28■■□□□ 1
SSBP4-210ENST00000601444 GTPBP10A4D1E9 387 aaKnown RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 PES1O00541 588 aaKnown RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 LETM1O95202 739 aaPredicted RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 ALADP13716 330 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 FCARP24071 287 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 CDC25CP30307 473 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms