RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 MLH1P40692 756 aa11.57□□□□□ -0.56
ZNF558-207ENST00000601372 CDH6P55285 790 aa11.57□□□□□ -0.56
ZNF558-207ENST00000601372 ASPHQ12797 758 aa11.57□□□□□ -0.56
ZNF558-207ENST00000601372 ARHGAP18Q8N392 663 aa11.57□□□□□ -0.56
ZNF558-207ENST00000601372 UBE2OQ9C0C9 1292 aaKnown RBP11.57□□□□□ -0.56
ZNF558-207ENST00000601372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 MAP3K7CLP57077 242 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 RPS6KA2Q15349 733 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 HIF1AQ16665 826 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 KLHL38Q2WGJ6 581 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 TMCO4Q5TGY1 634 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CRLF3Q8IUI8 442 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 TMEM139Q8IV31 216 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CALCAP01258 141 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CYP3A4P08684 503 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 MYBL2P10244 700 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ZNF235Q14590 738 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ATG16L1Q676U5 607 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 EPAS1Q99814 870 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 APOL5Q9BWW9 433 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 UVRAGQ9P2Y5 699 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ADAMTS3O15072 1205 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CKMP06732 381 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 DUSP28Q4G0W2 176 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 SPOPLQ6IQ16 392 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ITIH5Q86UX2 942 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 PALB2Q86YC2 1186 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 RCOR2Q8IZ40 523 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 AGR3Q8TD06 166 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ALKBH8Q96BT7 664 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 XPO7Q9UIA9 1087 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 KCNN4O15554 427 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 PRLRP16471 622 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ACADSBP45954 432 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 BTNL9Q6UXG8 535 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 LRRC34Q8IZ02 419 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ZNF558Q96NG5 402 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 SLC40A1Q9NP59 571 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 NFASCO94856 1347 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 TISP43B9A030 160 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 FGBP02675 491 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CKBP12277 381 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 MEA1Q16626 185 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 FTHL17Q9BXU8 183 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CERS4Q9HA82 394 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 KRT3P12035 628 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 DEUP1Q05D60 604 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 ELAVL2Q12926 359 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 PLD1Q13393 1074 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 GPAT2Q6NUI2 795 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 CTU1Q7Z7A3 348 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 TLR10Q9BXR5 811 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 KRT82Q9NSB4 513 aa11.56□□□□□ -0.56
ZNF558-207ENST00000601372 DDX43Q9NXZ2 648 aaKnown RBP11.56□□□□□ -0.56
ZNF558-207ENST00000601372 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 MCF2P10911 925 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 ITIH2P19823 946 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 LHX1P48742 406 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 JADE1Q6IE81 842 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 ACAD10Q6JQN1 1059 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 AENQ8WTP8 325 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 LPPQ93052 612 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 MRPL17Q9NRX2 175 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■■■□ 22.3
ZNF558-207ENST00000601372 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 CLGNO14967 610 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 KPNA1P52294 538 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 TAP1Q03518 808 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 ZNF720Q7Z2F6 126 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 ACTRT1Q8TDG2 376 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 EXT2Q93063 718 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 DDX23Q9BUQ8 820 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 MFSD1Q9H3U5 465 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 F8W8V4 182 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 RPL10AP62906 217 aaKnown RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 TTMPQ5BVD1 217 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 GIPC2Q8TF65 315 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 TRPV6Q9H1D0 765 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 VPS11Q9H270 941 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 HSD3B7Q9H2F3 369 aa11.55□□□□□ -0.56
ZNF558-207ENST00000601372 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-207ENST00000601372 FAM107AO95990 144 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms