RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SCN4BQ8IWT1 228 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 NELL1Q92832 810 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 SYAP1Q96A49 352 aaPredicted RBP24.2■■□□□ 1.46
SSBP4-209ENST00000601357 IER2Q9BTL4 223 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 SNX25Q9H3E2 840 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 TDP1Q9NUW8 608 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 TRAF3IP3Q9Y228 551 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 ZNF638Q14966 1978 aaKnown RBP24.2■■□□□ 1.46
SSBP4-209ENST00000601357 SPECC1L-ADORA2AF8WAN1 911 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 C4BPAP04003 597 aaKnown RBP24.19■■□□□ 1.46
SSBP4-209ENST00000601357 BDNFP23560 247 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 CTHP32929 405 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 KPNA1P52294 538 aaPredicted RBP24.19■■□□□ 1.46
SSBP4-209ENST00000601357 TNK2Q07912 1038 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 ZNF268Q14587 947 aaPredicted RBP24.19■■□□□ 1.46
SSBP4-209ENST00000601357 WDR44Q5JSH3 913 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 RALGPS2Q86X27 583 aaPredicted RBP24.19■■□□□ 1.46
SSBP4-209ENST00000601357 FSIP1Q8NA03 581 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 RIN3Q8TB24 985 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 KIF9Q9HAQ2 790 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 LMAN1LQ9HAT1 526 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 THG1LQ9NWX6 298 aaKnown RBP24.19■■□□□ 1.46
SSBP4-209ENST00000601357 WDR87Q6ZQQ6 2873 aa24.19■■□□□ 1.46
SSBP4-209ENST00000601357 VNN1O95497 513 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 LMNAP02545 664 aaKnown RBP24.18■■□□□ 1.46
SSBP4-209ENST00000601357 DLG4P78352 724 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 CYP27A1Q02318 531 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 CSTF1Q05048 431 aaKnown RBP24.18■■□□□ 1.46
SSBP4-209ENST00000601357 MDH1BQ5I0G3 518 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 TXNDC11Q6PKC3 985 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 OR6B3Q8NGW1 331 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 FAM83CQ9BQN1 747 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 DPEP3Q9H4B8 488 aa24.18■■□□□ 1.46
SSBP4-209ENST00000601357 NXF1Q9UBU9 619 aaKnown RBP24.18■■□□□ 1.46
SSBP4-209ENST00000601357 PHACTR2O75167 634 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 PTPN1P18031 435 aaKnown RBP24.17■■□□□ 1.46
SSBP4-209ENST00000601357 BIRC3Q13489 604 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 NCOA4Q13772 614 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 NFIL3Q16649 462 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 ADSSL1Q8N142 457 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 ZBTB44Q8NCP5 570 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 TMC2Q8TDI7 906 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 SLC22A12Q96S37 553 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 GDPD2Q9HCC8 539 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 GKN1Q9NS71 199 aa24.17■■□□□ 1.46
SSBP4-209ENST00000601357 HELZP42694 1942 aaKnown RBP24.16■■□□□ 1.46
SSBP4-209ENST00000601357 RIF1Q5UIP0 2472 aaKnown RBP24.16■■□□□ 1.46
SSBP4-209ENST00000601357 ZNF202O95125 648 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 KIF20AO95235 890 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 TDGF1P13385 188 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 GRIK1P39086 918 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 KCNB1Q14721 858 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 ZNF699Q32M78 642 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 ITPRIPL2Q3MIP1 535 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 ZACNQ401N2 412 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 C1orf220Q5T0J3 134 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 B3GALNT2Q8NCR0 500 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 TTC8Q8TAM2 541 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 C8orf48Q96LL4 319 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 TTLL2Q9BWV7 592 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 TMEM30AQ9NV96 361 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 GCNT4Q9P109 453 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 PCDHGA2Q9Y5H1 932 aa24.16■■□□□ 1.46
SSBP4-209ENST00000601357 FAM186AA6NE01 2351 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 IKBKBO14920 756 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 TRIM66O15016 1216 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 MAPK13O15264 365 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 CACNA2D1P54289 1103 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 USP46P62068 366 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 NOP14P78316 857 aaKnown RBP24.15■■□□□ 1.46
SSBP4-209ENST00000601357 GAS6Q14393 721 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 TSSK4Q6SA08 328 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 DENND5BQ6ZUT9 1274 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 SUMF1Q8NBK3 374 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 CCDC47Q96A33 483 aaKnown RBP24.15■■□□□ 1.46
SSBP4-209ENST00000601357 CYP2S1Q96SQ9 504 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 SMYD3Q9H7B4 428 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 HPS4Q9NQG7 708 aa24.15■■□□□ 1.46
SSBP4-209ENST00000601357 OTOL1A6NHN0 477 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-209ENST00000601357 A8MXQ7 604 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 CALUO43852 315 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-209ENST00000601357 LILRB5O75023 590 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 FAM160A1Q05DH4 1040 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 ZNF667Q5HYK9 610 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 CEP135Q66GS9 1140 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 GUF1Q8N442 669 aaKnown RBP24.14■■□□□ 1.45
SSBP4-209ENST00000601357 CHFRQ96EP1 664 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 B3GNT5Q9BYG0 378 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 FAM126AQ9BYI3 521 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-209ENST00000601357 ELOVL4Q9GZR5 314 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 ZSCAN32Q9NX65 697 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 FRMD4BQ9Y2L6 1034 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 ZNF292O60281 2723 aa24.14■■□□□ 1.45
SSBP4-209ENST00000601357 TRAV19A0A0A6YYK7 116 aa24.13■■□□□ 1.45
SSBP4-209ENST00000601357 C2orf78A6NCI8 922 aa24.13■■□□□ 1.45
SSBP4-209ENST00000601357 F8VP50 259 aa24.13■■□□□ 1.45
SSBP4-209ENST00000601357 KINO60870 393 aaKnown RBP24.13■■□□□ 1.45
SSBP4-209ENST00000601357 USP17L7P0C7H9 530 aa24.13■■□□□ 1.45
SSBP4-209ENST00000601357 ANXA13P27216 316 aa24.13■■□□□ 1.45
SSBP4-209ENST00000601357 CDH8P55286 799 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms