RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 AP1G2O75843 785 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 LSM8O95777 96 aaKnown RBP15.19■□□□□ 0.02
UPF1-211ENST00000600868 CYP1A1P04798 512 aaPredicted RBP15.19■□□□□ 0.02
UPF1-211ENST00000600868 SETSIPP0DME0 302 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 NPR3P17342 541 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 CYP2F1P24903 491 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 GPD2P43304 727 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 SLC8A3P57103 927 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 BST2Q10589 180 aaKnown RBP15.19■□□□□ 0.02
UPF1-211ENST00000600868 DUSP4Q13115 394 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 DENND1BQ6P3S1 775 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 PALB2Q86YC2 1186 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 CCDC170Q8IYT3 715 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 ATG2AQ2TAZ0 1938 aa15.19■□□□□ 0.02
UPF1-211ENST00000600868 NRDCO43847 1150 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 GLUD1P00367 558 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 HAPLN1P10915 354 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 GZMAP12544 262 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 POU3F3P20264 500 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 ELF1P32519 619 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 SSTR3P32745 418 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 CLCN4P51793 760 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 GRIN2CQ14957 1233 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 DUSP6Q16828 381 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 CLEC20AQ6ZU45 233 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 RTL10Q7L3V2 364 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 ADGRD2Q7Z7M1 963 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 PASD1Q8IV76 773 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 WDTC1Q8N5D0 677 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 UBA3Q8TBC4 463 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 STK32AQ8WU08 396 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 SLC22A17Q8WUG5 538 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 SLC35F5Q8WV83 523 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 PPP2R3CQ969Q6 453 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 C8orf48Q96LL4 319 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 CEP295NLQ96MC4 621 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 CDCA3Q99618 268 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 SMOQ99835 787 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.18■□□□□ 0.02
UPF1-211ENST00000600868 RHOBTB2Q9BYZ6 727 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 CRISPLD1Q9H336 500 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 PRDM12Q9H4Q4 367 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 TLE6Q9H808 572 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 DMAP1Q9NPF5 467 aaPredicted RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
UPF1-211ENST00000600868 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 FBXW11Q9UKB1 542 aa15.18■□□□□ 0.02
UPF1-211ENST00000600868 A0A087X0T9 212 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
UPF1-211ENST00000600868 TRIM66O15016 1216 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 AKR1B10O60218 316 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 BEST1O76090 585 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 SEC24AO95486 1093 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 FAM228BP0C875 321 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 CYLC1P35663 651 aaPredicted RBP15.17■□□□□ 0.02
UPF1-211ENST00000600868 GRIK1P39086 918 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 CDR1P51861 262 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 KIF11P52732 1056 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 CACNA2D1P54289 1103 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 NOMO3P69849 1222 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 PDE4CQ08493 712 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 MGAT5BQ3V5L5 792 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 ZMIZ2Q8NF64 920 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 SECISBP2LQ93073 1101 aaKnown RBP15.17■□□□□ 0.02
UPF1-211ENST00000600868 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 NOX5Q96PH1 765 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
UPF1-211ENST00000600868 CYP4F11Q9HBI6 524 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 PNPLA8Q9NP80 782 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 SLC27A5Q9Y2P5 690 aa15.17■□□□□ 0.02
UPF1-211ENST00000600868 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 F8VP50 259 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 PER2O15055 1255 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 RPL34P49207 117 aaKnown RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 CCZ1BP86790 482 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms