RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PFKLP17858 780 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 SYKP43405 635 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 SOX9P48436 509 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 MYL6P60660 151 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
VRK3-221ENST00000600284 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 SUMF1Q8NBK3 374 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 MYLPFQ96A32 169 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 PCED1BQ96HM7 432 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
VRK3-221ENST00000600284 SMG9Q9H0W8 520 aaKnown RBP16.88■□□□□ 0.29
VRK3-221ENST00000600284 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 KCTD10Q9H3F6 313 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 GKN1Q9NS71 199 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 TRIM66O15016 1216 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 TADA3O75528 432 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 RPN1P04843 607 aaKnown RBP16.87■□□□□ 0.29
VRK3-221ENST00000600284 USP17L7P0C7H9 530 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
VRK3-221ENST00000600284 BDNFP23560 247 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 ANXA13P27216 316 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 GRIK1P39086 918 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CXCL12P48061 93 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 PPP3CCP48454 512 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 PDE6CP51160 858 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 AMPD2Q01433 879 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CYP27A1Q02318 531 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 FAM160A1Q05DH4 1040 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 RUNX3Q13761 415 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CCDC142Q17RM4 750 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CC2D1AQ6P1N0 951 aaPredicted RBP16.87■□□□□ 0.29
VRK3-221ENST00000600284 TXNDC11Q6PKC3 985 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 RUBCNQ92622 972 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CCDC47Q96A33 483 aaKnown RBP16.87■□□□□ 0.29
VRK3-221ENST00000600284 C8orf48Q96LL4 319 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CCL26Q9Y258 94 aa16.87■□□□□ 0.29
VRK3-221ENST00000600284 CFAP54Q96N23 3096 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 TRAV19A0A0A6YYK7 116 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
VRK3-221ENST00000600284 RHOBTB3O94955 611 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
VRK3-221ENST00000600284 C4BPAP04003 597 aaKnown RBP16.86■□□□□ 0.29
VRK3-221ENST00000600284 TDGF1P13385 188 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 TCF3P15923 654 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 NDUFA8P51970 172 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
VRK3-221ENST00000600284 TNK2Q07912 1038 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 DENND5BQ6ZUT9 1274 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 TTC8Q8TAM2 541 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 PLEKHO2Q8TD55 490 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 TMC2Q8TDI7 906 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 TTLL2Q9BWV7 592 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 EPC1Q9H2F5 836 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 NXF1Q9UBU9 619 aaKnown RBP16.86■□□□□ 0.29
VRK3-221ENST00000600284 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 DENND4CQ5VZ89 1909 aa16.86■□□□□ 0.29
VRK3-221ENST00000600284 A8MXQ7 604 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 IKBKBO14920 756 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 MAPK13O15264 365 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 CALUO43852 315 aaPredicted RBP16.85■□□□□ 0.29
VRK3-221ENST00000600284 NR3C1P04150 777 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 CASP4P49662 377 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 BIRC3Q13489 604 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 CCINQ13939 588 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 GAS6Q14393 721 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 PON2Q15165 354 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 NFIL3Q16649 462 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 ZNF699Q32M78 642 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 MDH1BQ5I0G3 518 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 TDRD10Q5VZ19 366 aaKnown RBP16.85■□□□□ 0.29
VRK3-221ENST00000600284 TSSK4Q6SA08 328 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 ELOVL4Q9GZR5 314 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 HPS4Q9NQG7 708 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 NME7Q9Y5B8 376 aa16.85■□□□□ 0.29
VRK3-221ENST00000600284 TRDMT1O14717 391 aaKnown RBP16.84■□□□□ 0.29
VRK3-221ENST00000600284 CKMP06732 381 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 P4HA1P13674 534 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 HDCP19113 662 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 DPYDQ12882 1025 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 NCOA4Q13772 614 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 ZNF667Q5HYK9 610 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 KRBA2Q6ZNG9 492 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 KIAA1958Q8N8K9 716 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 B3GALNT2Q8NCR0 500 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 TAF4BQ92750 862 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 EXOC4Q96A65 974 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 TNIP3Q96KP6 325 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 CYP2S1Q96SQ9 504 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 EBF3Q9H4W6 596 aa16.84■□□□□ 0.29
VRK3-221ENST00000600284 TRPC7Q9HCX4 862 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms