RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 DRAP1Q14919 205 aaPredicted RBP20.04■□□□□ 0.8
CCDC9-205ENST00000600117 ZNF394Q53GI3 561 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 MDH1BQ5I0G3 518 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 ANKRD54Q6NXT1 300 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 TMEM270Q6UE05 265 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 TMEM105Q8N8V8 129 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 MYCBPAPQ8TBZ2 947 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 TMEM176AQ96HP8 235 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 TNIP3Q96KP6 325 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 STK33Q9BYT3 514 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 SORCS3Q9UPU3 1222 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 NR2E1Q9Y466 385 aa20.04■□□□□ 0.8
CCDC9-205ENST00000600117 MTCL1Q9Y4B5 1905 aaKnown RBP20.04■□□□□ 0.8
CCDC9-205ENST00000600117 FOXN3O00409 490 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 SEC24AO95486 1093 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 SPATA31D3P0C874 917 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 PNMA6AP0CW24 399 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 ATF2P15336 505 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 HOXB8P17481 243 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 CDR1P51861 262 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 PLCB2Q00722 1185 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 SMARCB1Q12824 385 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 NFE2Q16621 373 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 SYCE2Q6PIF2 218 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 SPATA31D4Q6ZUB0 917 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 TTC9BQ8N6N2 239 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 ATAD1Q8NBU5 361 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 RBBP8NLQ8NC74 664 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 NKD2Q969F2 451 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-205ENST00000600117 MYLPFQ96A32 169 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 PCED1BQ96HM7 432 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 PGLYRP2Q96PD5 576 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 TTYH3Q9C0H2 523 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 CRISPLD1Q9H336 500 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 NLRC4Q9NPP4 1024 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 PTPRDP23468 1912 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 NCOR2Q9Y618 2525 aa20.03■□□□□ 0.8
CCDC9-205ENST00000600117 TPM3P06753 285 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 JAM2P57087 298 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 ADCY1Q08828 1119 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 RAPGEF1Q13905 1077 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 MAPRE1Q15691 268 aaKnown RBP20.02■□□□□ 0.8
CCDC9-205ENST00000600117 LLGL2Q6P1M3 1020 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 PAQR9Q6ZVX9 377 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 FAM71AQ8IYT1 594 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 C12orf29Q8N999 325 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 HDAC7Q8WUI4 952 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 B3GNT5Q9BYG0 378 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 TRIM5Q9C035 493 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 CEP72Q9P209 647 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 MAFFQ9ULX9 164 aa20.02■□□□□ 0.8
CCDC9-205ENST00000600117 ITIH6Q6UXX5 1313 aa20.02■□□□□ 0.79
CCDC9-205ENST00000600117 F8VZ95 297 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 CALCAP01258 141 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 PAEPP09466 180 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 KRT5P13647 590 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 SP100P23497 879 aaPredicted RBP20.01■□□□□ 0.79
CCDC9-205ENST00000600117 ZNF75DP51815 510 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 FIGNQ5HY92 759 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 VSTM4Q8IW00 320 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 TCEAL8Q8IYN2 117 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 SPPL2BQ8TCT7 592 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 C2orf15Q8WU43 125 aaKnown RBP20.01■□□□□ 0.79
CCDC9-205ENST00000600117 BAP1Q92560 729 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 ZSWIM1Q9BR11 485 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 ABCB6Q9NP58 842 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 MAN1C1Q9NR34 630 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 FAM49BQ9NUQ9 324 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 ABI2Q9NYB9 513 aaPredicted RBP20.01■□□□□ 0.79
CCDC9-205ENST00000600117 PCDHB5Q9Y5E4 795 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 CEP250Q9BV73 2442 aa20.01■□□□□ 0.79
CCDC9-205ENST00000600117 CLDN5O00501 218 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 CCDC130P13994 396 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 TRIM21P19474 475 aaKnown RBP20■□□□□ 0.79
CCDC9-205ENST00000600117 DUSP4Q13115 394 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 ARHGAP17Q68EM7 881 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 ASTLQ6HA08 431 aaPredicted RBP20■□□□□ 0.79
CCDC9-205ENST00000600117 C4orf50Q6ZRC1 276 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 SPATA2LQ8IUW3 424 aaPredicted RBP20■□□□□ 0.79
CCDC9-205ENST00000600117 FUKQ8N0W3 1084 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 TFAP2BQ92481 460 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 FUBP3Q96I24 572 aaKnown RBP eCLIP20■□□□□ 0.79
CCDC9-205ENST00000600117 HEXIM2Q96MH2 286 aaKnown RBP20■□□□□ 0.79
CCDC9-205ENST00000600117 APOL5Q9BWW9 433 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 RHOBTB2Q9BYZ6 727 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 ZNF518BQ9C0D4 1074 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 PLEKHA4Q9H4M7 779 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 CYP4F11Q9HBI6 524 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 HSFX1Q9UBD0 423 aa20■□□□□ 0.79
CCDC9-205ENST00000600117 TPRP12270 2363 aaKnown RBP20■□□□□ 0.79
CCDC9-205ENST00000600117 HAPLN1P10915 354 aaPredicted RBP19.99■□□□□ 0.79
CCDC9-205ENST00000600117 CLCN1P35523 988 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 USP8P40818 1118 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 CYP27A1Q02318 531 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 FAM35AQ86V20 835 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 SLC2A14Q8TDB8 520 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 CASP10Q92851 521 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 NECTIN4Q96NY8 510 aa19.99■□□□□ 0.79
CCDC9-205ENST00000600117 HNRNPABQ99729 332 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms