RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CASP5P51878 434 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 ST3GAL2Q16842 350 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 FAM171BQ6P995 826 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 GPD1LQ8N335 351 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 RPLP0P6Q8NHW5 317 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 ANKRD36BP1Q96IX9 119 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 HHIPQ96QV1 700 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 MTMR12Q9C0I1 747 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 PDE11AQ9HCR9 933 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 GCNT4Q9P109 453 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 EBF1Q9UH73 591 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 SIX4Q9UIU6 781 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 MORC2Q9Y6X9 1032 aaPredicted RBP22.68■■□□□ 1.22
PNKP-212ENST00000599454 GOLGA8IPA6NC78 632 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 GOLGA8JA6NMD2 632 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 KRT37O76014 449 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 APBB3O95704 486 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 MPLP40238 635 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 STAT6P42226 847 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 KCNB1Q14721 858 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 SURF1Q15526 300 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 MAPRE1Q15691 268 aaKnown RBP22.67■■□□□ 1.22
PNKP-212ENST00000599454 ELF2Q15723 593 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 SOWAHAQ2M3V2 549 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 EML3Q32P44 896 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 PLK5Q496M5 336 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 STPG1Q5TH74 334 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 VSTM1Q6UX27 236 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 SCN4BQ8IWT1 228 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 SPATA17Q96L03 361 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 CYP2S1Q96SQ9 504 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 PANK4Q9NVE7 773 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 CDH9Q9ULB4 789 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 ARHGAP26Q9UNA1 814 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 MYOFQ9NZM1 2061 aa22.67■■□□□ 1.22
PNKP-212ENST00000599454 RHOBTB1O94844 696 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 KCNA4P22459 653 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 CUL4AQ13619 759 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 DMC1Q14565 340 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 CCDC6Q16204 474 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 STXBP4Q6ZWJ1 553 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 LIMS2Q7Z4I7 341 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 KIAA1958Q8N8K9 716 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 ARL14EPQ8N8R7 260 aaPredicted RBP22.66■■□□□ 1.22
PNKP-212ENST00000599454 SH3RF2Q8TEC5 729 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 CHAMP1Q96JM3 812 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 CLIC6Q96NY7 704 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 SLC22A12Q96S37 553 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 INTS13Q9NVM9 706 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 EHD2Q9NZN4 543 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 MAGEC2Q9UBF1 373 aaPredicted RBP22.66■■□□□ 1.22
PNKP-212ENST00000599454 WNT6Q9Y6F9 365 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 USP24Q9UPU5 2620 aa22.66■■□□□ 1.22
PNKP-212ENST00000599454 MYO18AQ92614 2054 aaKnown RBP22.66■■□□□ 1.22
PNKP-212ENST00000599454 NFATC1O95644 943 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 TNNC2P02585 160 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 HDCP19113 662 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 NAIF1Q69YI7 327 aaPredicted RBP22.65■■□□□ 1.22
PNKP-212ENST00000599454 C11orf74Q86VG3 221 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 CCDC65Q8IXS2 484 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 NOC3LQ8WTT2 800 aaKnown RBP22.65■■□□□ 1.22
PNKP-212ENST00000599454 HPDLQ96IR7 371 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 SYT15Q9BQS2 421 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 DUSP15Q9H1R2 295 aaPredicted RBP22.65■■□□□ 1.22
PNKP-212ENST00000599454 PCIF1Q9H4Z3 704 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 ANGPTL2Q9UKU9 493 aa22.65■■□□□ 1.22
PNKP-212ENST00000599454 ZNF233A6NK53 670 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 PMLP29590 882 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 PSMD2Q13200 908 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 DUOXA2Q1HG44 320 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 SCARA3Q6AZY7 606 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 TTC16Q8NEE8 873 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 EZH1Q92800 747 aaPredicted RBP22.64■■□□□ 1.21
PNKP-212ENST00000599454 RXFP3Q9NSD7 469 aa22.64■■□□□ 1.21
PNKP-212ENST00000599454 PI4KAP42356 2102 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 C2orf78A6NCI8 922 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 PRPF6O94906 941 aaKnown RBP22.63■■□□□ 1.21
PNKP-212ENST00000599454 ANXA13P27216 316 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 PPP3CCP48454 512 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 RESTQ13127 1097 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 CCDC142Q17RM4 750 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 N4BP2L1Q5TBK1 243 aaPredicted RBP22.63■■□□□ 1.21
PNKP-212ENST00000599454 KBTBD7Q8WVZ9 684 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 FAM84AQ96KN4 292 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 LSM14BQ9BX40 385 aaKnown RBP22.63■■□□□ 1.21
PNKP-212ENST00000599454 FGFBP2Q9BYJ0 223 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 KIAA1586Q9HCI6 787 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 POLR3BQ9NW08 1133 aaPredicted RBP22.63■■□□□ 1.21
PNKP-212ENST00000599454 TRPM5Q9NZQ8 1165 aa22.63■■□□□ 1.21
PNKP-212ENST00000599454 TRIM66O15016 1216 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 HCRTO43612 131 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 WARSP23381 471 aaKnown RBP22.62■■□□□ 1.21
PNKP-212ENST00000599454 GRIK1P39086 918 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 SHC2P98077 582 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 RNF43Q68DV7 783 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 DENND5BQ6ZUT9 1274 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 TSTD1Q8NFU3 115 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 OR5B17Q8NGF7 314 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 MYLPFQ96A32 169 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms