RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 SYT13Q7L8C5 426 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 BRAPQ7Z569 592 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 NT5DC4Q86YG4 428 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 SFTPA1Q8IWL2 248 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 SYCP3Q8IZU3 236 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 CCDC33Q8N5R6 958 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 GLIS3Q8NEA6 775 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 OR5B17Q8NGF7 314 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 MYLPFQ96A32 169 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 TRMT2BQ96GJ1 504 aaKnown RBP20.6■□□□□ 0.89
IRF3-222ENST00000599144 MYRFLQ96LU7 910 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 LSM14BQ9BX40 385 aaKnown RBP20.6■□□□□ 0.89
IRF3-222ENST00000599144 ABCB6Q9NP58 842 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 UXTQ9UBK9 157 aaPredicted RBP20.6■□□□□ 0.89
IRF3-222ENST00000599144 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 PCDHGA5Q9Y5G8 931 aa20.6■□□□□ 0.89
IRF3-222ENST00000599144 MAP1BP46821 2468 aaKnown RBP20.6■□□□□ 0.89
IRF3-222ENST00000599144 PATE3B3GLJ2 98 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 RBP5P82980 135 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
IRF3-222ENST00000599144 RRAGBQ5VZM2 374 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 TTC30AQ86WT1 665 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 LRRC52Q8N7C0 313 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 TSTD1Q8NFU3 115 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 CACTINQ8WUQ7 758 aaKnown RBP20.59■□□□□ 0.89
IRF3-222ENST00000599144 HPS3Q969F9 1004 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 SYT15Q9BQS2 421 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 CRTAC1Q9NQ79 661 aa20.59■□□□□ 0.89
IRF3-222ENST00000599144 A0A087X0B3 334 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 GABRDO14764 452 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 CAVIN2O95810 425 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 PDGFRBP09619 1106 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 TMEM191BP0C7N4 346 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 GAP43P17677 238 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 HDCP19113 662 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 SPINK2P20155 84 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 BDNFP23560 247 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 OPRD1P41143 372 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 MESP2Q0VG99 397 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 KCNB1Q14721 858 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 ELF2Q15723 593 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 GAB4Q2WGN9 574 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 FBXO43Q4G163 708 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 ANO7Q6IWH7 933 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 SV2BQ7L1I2 683 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 TMEM86AQ8N2M4 240 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 TOP6BLQ8N6T0 577 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 KBTBD7Q8WVZ9 684 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 ATP2A3Q93084 1043 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 TMEM206Q9H813 350 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 ZDHHC4Q9NPG8 344 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 GDAP2Q9NXN4 497 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 STK17AQ9UEE5 414 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 CCDC39Q9UFE4 941 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 ITGA11Q9UKX5 1188 aa20.58■□□□□ 0.89
IRF3-222ENST00000599144 BCLAF3A2AJT9 711 aaKnown RBP20.57■□□□□ 0.88
IRF3-222ENST00000599144 SOBPA7XYQ1 873 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 K7EQS6 105 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 HNRNPLP14866 589 aaKnown RBP eCLIP20.57■□□□□ 0.88
IRF3-222ENST00000599144 NOVA1P51513 510 aaKnown RBP20.57■□□□□ 0.88
IRF3-222ENST00000599144 CFAP221Q4G0U5 840 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 FAM171BQ6P995 826 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 USP33Q8TEY7 942 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 ACDQ96AP0 544 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 SMPD4Q9NXE4 827 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 SEL1LQ9UBV2 794 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 NME7Q9Y5B8 376 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 CHD8Q9HCK8 2581 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 ATG2BQ96BY7 2078 aa20.57■□□□□ 0.88
IRF3-222ENST00000599144 RHOBTB1O94844 696 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 TOP3BO95985 862 aaKnown RBP20.56■□□□□ 0.88
IRF3-222ENST00000599144 GARTP22102 1010 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 PCSK1P29120 753 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 GRIK1P39086 918 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 SLC6A11P48066 632 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 LHX1P48742 406 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 CYP27A1Q02318 531 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 CBWD2Q8IUF1 395 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 HPDLQ96IR7 371 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 PANK4Q9NVE7 773 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 MAGEC2Q9UBF1 373 aaPredicted RBP20.56■□□□□ 0.88
IRF3-222ENST00000599144 EBF1Q9UH73 591 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 ARHGAP26Q9UNA1 814 aa20.56■□□□□ 0.88
IRF3-222ENST00000599144 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
IRF3-222ENST00000599144 RALGAPA1Q6GYQ0 2036 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 LNP1A1A4G5 178 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 LEFTY2O00292 366 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 LDHAP00338 332 aaKnown RBP20.55■□□□□ 0.88
IRF3-222ENST00000599144 CACNA2D1P54289 1103 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 FILIP1Q7Z7B0 1213 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 GPD1LQ8N335 351 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 FRMD1Q8N878 549 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 MDGA1Q8NFP4 955 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 RLN3Q8WXF3 142 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 MRPL45Q9BRJ2 306 aaKnown RBP20.55■□□□□ 0.88
IRF3-222ENST00000599144 RNF38Q9H0F5 515 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 INTS13Q9NVM9 706 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
IRF3-222ENST00000599144 PCDHB13Q9Y5F0 798 aa20.55■□□□□ 0.88
IRF3-222ENST00000599144 SRPRBQ9Y5M8 271 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms