RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 FNTBP49356 437 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 CYP2J2P51589 502 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 MYLPFQ96A32 169 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 FUBP3Q96I24 572 aaKnown RBP eCLIP16.22■□□□□ 0.19
TGFB1-202ENST00000597453 SLC22A12Q96S37 553 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
TGFB1-202ENST00000597453 EBF3Q9H4W6 596 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 KIF9Q9HAQ2 790 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 KIAA1586Q9HCI6 787 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
TGFB1-202ENST00000597453 NME7Q9Y5B8 376 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 NCOR2Q9Y618 2525 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 UBE4BO95155 1302 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 PAPSS2O95340 614 aaPredicted RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CST3P01034 146 aaPredicted RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 PDGFRBP09619 1106 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 DLATP10515 647 aaKnown RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 ARSAP15289 507 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 TGM1P22735 817 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 WARSP23381 471 aaKnown RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 SYKP43405 635 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 NDUFA8P51970 172 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 SRSF5Q13243 272 aaKnown RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CUL4BQ13620 913 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 RUNX3Q13761 415 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 ZNF268Q14587 947 aaPredicted RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 PSMD6Q15008 389 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 PKN3Q6P5Z2 889 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 FSIP1Q8NA03 581 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CYP2S1Q96SQ9 504 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 MRPL45Q9BRJ2 306 aaKnown RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 TRPC7Q9HCX4 862 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 PARD6AQ9NPB6 346 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CHMP5Q9NZZ3 219 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 UXTQ9UBK9 157 aaPredicted RBP16.21■□□□□ 0.19
TGFB1-202ENST00000597453 SERTAD1Q9UHV2 236 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 CDH9Q9ULB4 789 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 SPTBN2O15020 2390 aa16.21■□□□□ 0.19
TGFB1-202ENST00000597453 KIAA1549LQ6ZVL6 1849 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 RALGAPA1Q6GYQ0 2036 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 HRO43593 1189 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 TNNI1P19237 187 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 MAGEA11P43364 429 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 AFMP43652 599 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 BMT2Q1RMZ1 405 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 NAIF1Q69YI7 327 aaPredicted RBP16.2■□□□□ 0.18
TGFB1-202ENST00000597453 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
TGFB1-202ENST00000597453 FSTL4Q6MZW2 842 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 C4orf50Q6ZRC1 276 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 PRR23BQ6ZRT6 265 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 GRAMD1CQ8IYS0 662 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 XXYLT1Q8NBI6 393 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 SECISBP2LQ93073 1101 aaKnown RBP16.2■□□□□ 0.18
TGFB1-202ENST00000597453 MMS19Q96T76 1030 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 FBRSL1Q9HCM7 1045 aaKnown RBP16.2■□□□□ 0.18
TGFB1-202ENST00000597453 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 DLL3Q9NYJ7 618 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 GCNT4Q9P109 453 aa16.2■□□□□ 0.18
TGFB1-202ENST00000597453 MAGEC2Q9UBF1 373 aaPredicted RBP16.2■□□□□ 0.18
TGFB1-202ENST00000597453 SPAG17Q6Q759 2223 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 SDK1Q7Z5N4 2213 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 EML5Q05BV3 1969 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 C2orf78A6NCI8 922 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 MYL1P05976 194 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 CKMP06732 381 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 BDNFP23560 247 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 USP46P62068 366 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 CYP27A1Q02318 531 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 FAM160A1Q05DH4 1040 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 USP4Q13107 963 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 PUM1Q14671 1186 aaKnown RBP eCLIP16.19■□□□□ 0.18
TGFB1-202ENST00000597453 MTF1Q14872 753 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 ZNF77Q15935 545 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 RSPO4Q2I0M5 234 aaPredicted RBP16.19■□□□□ 0.18
TGFB1-202ENST00000597453 VSTM1Q6UX27 236 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 DGLUCYQ7Z3D6 616 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 LONP2Q86WA8 852 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 SYNPOQ8N3V7 929 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 PLEKHO2Q8TD55 490 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 PAGE5Q96GU1 130 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 PCED1BQ96HM7 432 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 FNBP1Q96RU3 617 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 GMEB2Q9UKD1 530 aa16.19■□□□□ 0.18
TGFB1-202ENST00000597453 TRAV19A0A0A6YYK7 116 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 PVALEFA0A1B0GWK0 134 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 MED19A0JLT2 244 aaPredicted RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 TRDMT1O14717 391 aaKnown RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 EGFP01133 1207 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 USP17L7P0C7H9 530 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 CASP4P49662 377 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms