RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ADORA2BP29275 332 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 GRIK1P39086 918 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 MTHFRP42898 656 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 STILQ15468 1287 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 AAK1Q2M2I8 961 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 PUS10Q3MIT2 529 aaKnown RBP15.23■□□□□ 0.03
VRK3-213ENST00000597215 ARHGAP17Q68EM7 881 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 SARM1Q6SZW1 724 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 C8orf48Q96LL4 319 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 CEP295NLQ96MC4 621 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 ZNF512Q96ME7 567 aaPredicted RBP15.23■□□□□ 0.03
VRK3-213ENST00000597215 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 DMAP1Q9NPF5 467 aaPredicted RBP15.23■□□□□ 0.03
VRK3-213ENST00000597215 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 CEP72Q9P209 647 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 FAM50BQ9Y247 325 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
VRK3-213ENST00000597215 F8VP50 259 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 FOXN3O00409 490 aaPredicted RBP15.22■□□□□ 0.03
VRK3-213ENST00000597215 MBTPS2O43462 519 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 GNA15P30679 374 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 PBX1P40424 430 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 GPR15P49685 360 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 BPIFB4P59827 614 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 TFF2Q03403 129 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 PTK2Q05397 1052 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 PTPN21Q16825 1174 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 DDR2Q16832 855 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 ATAT1Q5SQI0 421 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 SUSD6Q92537 303 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 NECTIN4Q96NY8 510 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
VRK3-213ENST00000597215 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 O00370 1275 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 CYP26A1O43174 497 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 MED7O43513 233 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
VRK3-213ENST00000597215 CSH1P0DML2 217 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 CSH2P0DML3 217 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 NPR3P17342 541 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 PTPN2P17706 415 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 BRD2P25440 801 aaKnown RBP15.21■□□□□ 0.03
VRK3-213ENST00000597215 STAT1P42224 750 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 CACNA2D1P54289 1103 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 MAP3K7CLP57077 242 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 JAM2P57087 298 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 SLC8A3P57103 927 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 CNGA2Q16280 664 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 TAF12Q16514 161 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 GOLGA7BQ2TAP0 167 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 FIGNQ5HY92 759 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 SDHAF4Q5VUM1 108 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 PTCRAQ6ISU1 281 aaPredicted RBP15.21■□□□□ 0.03
VRK3-213ENST00000597215 LCLAT1Q6UWP7 414 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 GRASPQ7Z6J2 395 aaPredicted RBP15.21■□□□□ 0.03
VRK3-213ENST00000597215 ANKRD52Q8NB46 1076 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 LEMD2Q8NC56 503 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.21■□□□□ 0.03
VRK3-213ENST00000597215 GIPC2Q8TF65 315 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 TFAP2BQ92481 460 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 IQCDQ96DY2 449 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 NUP58Q9BVL2 599 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 CSNK1G1Q9HCP0 422 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 ASAH2Q9NR71 780 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 TMEM30AQ9NV96 361 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
VRK3-213ENST00000597215 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.21■□□□□ 0.03
VRK3-213ENST00000597215 CLUHO75153 1309 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 PATJQ8NI35 1801 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 THAP12O43422 761 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 RHOP08100 348 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 CLCN1P35523 988 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 SOX5P35711 763 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 BCAT1P54687 386 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 MRPS5P82675 430 aaKnown RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 CBX2Q14781 532 aaPredicted RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 PABPC1LQ4VXU2 614 aaKnown RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 CLEC20AQ6ZU45 233 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 FMNL3Q8IVF7 1028 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 FEZF2Q8TBJ5 459 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 GPR152Q8TDT2 470 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 KCNK16Q96T55 309 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 SMOQ99835 787 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 CORO1BQ9BR76 489 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 WDR6Q9NNW5 1121 aaKnown RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms