RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 MYCBPAPQ8TBZ2 947 aa16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 C8orf33Q9H7E9 229 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 TDP1Q9NUW8 608 aa16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-208ENST00000597023 TICRRQ7Z2Z1 1910 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 F8VP50 259 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 RHOBTB3O94955 611 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 LMNAP02545 664 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 MYL1P05976 194 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 CHRNB1P11230 501 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 DDX6P26196 483 aaKnown RBP eCLIP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 ATICP31939 592 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 CTHP32929 405 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 GAS6Q14393 721 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 SLC9A9Q8IVB4 645 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 CCDC47Q96A33 483 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 MYRFLQ96LU7 910 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 B3GNT5Q9BYG0 378 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 SDCBP2Q9H190 292 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 CHRDQ9H2X0 955 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 TMEM30AQ9NV96 361 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 FBXO4Q9UKT5 387 aa16.61■□□□□ 0.25
PPFIA4-208ENST00000597023 COL4A2P08572 1712 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ARSAP15289 507 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ANXA13P27216 316 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 CLDN10P78369 228 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ORC1Q13415 861 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ITPRIPL2Q3MIP1 535 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 SPOPLQ6IQ16 392 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ZC3H14Q6PJT7 736 aaKnown RBP16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 VSTM1Q6UX27 236 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 Q6ZS52 159 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 DENND5BQ6ZUT9 1274 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 FAM83CQ9BQN1 747 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 HPS4Q9NQG7 708 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 FRMD4BQ9Y2L6 1034 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 VPS13AQ96RL7 3174 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 CACNA1IQ9P0X4 2223 aa16.6■□□□□ 0.25
PPFIA4-208ENST00000597023 ZFHX2Q9C0A1 2572 aaPredicted RBP16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 AKAP3O75969 853 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 STAU1O95793 577 aaKnown RBP16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 CKMP06732 381 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 NR2F2P24468 414 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 HOXC13P31276 330 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 AP3M2P53677 418 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 SATB1Q01826 763 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 PNOCQ13519 176 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 RUNX3Q13761 415 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 CC2D1AQ6P1N0 951 aaPredicted RBP16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 RALGPS2Q86X27 583 aaPredicted RBP16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 B3GALNT2Q8NCR0 500 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 SPATA17Q96L03 361 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 TRAF3IP3Q9Y228 551 aa16.59■□□□□ 0.25
PPFIA4-208ENST00000597023 TRAV19A0A0A6YYK7 116 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 TRIM66O15016 1216 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 ABL1P00519 1130 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 USP17L7P0C7H9 530 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 TRIM49P0CI25 452 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 TRIM49CP0CI26 452 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 VAMP7P51809 220 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 MLLT6P55198 1093 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 ZNF528Q3MIS6 628 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 SV2AQ7L0J3 742 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 DCLK2Q8N568 766 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 ATRIPQ8WXE1 791 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 HINFPQ9BQA5 517 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 PRMT8Q9NR22 394 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 C2orf42Q9NWW7 574 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 GCNT4Q9P109 453 aa16.58■□□□□ 0.24
PPFIA4-208ENST00000597023 KIF20AO95235 890 aa16.57■□□□□ 0.24
PPFIA4-208ENST00000597023 HLA-DRAP01903 254 aa16.57■□□□□ 0.24
PPFIA4-208ENST00000597023 HDCP19113 662 aa16.57■□□□□ 0.24
PPFIA4-208ENST00000597023 PIK3CAP42336 1068 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms