RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 TDP2O95551 362 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 SLC9A1P19634 815 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 LHX1P48742 406 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 NCF4Q15080 339 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 ADCK1Q86TW2 530 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 RAVER2Q9HCJ3 691 aaKnown RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 RAD18Q9NS91 495 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 ITM2BQ9Y287 266 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 GRK3P35626 688 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 MAGEA4P43358 317 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 NIPA1Q7RTP0 329 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 FEZF2Q8TBJ5 459 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 RAET1EQ8TD07 263 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 SRRM3A6NNA2 597 aaPredicted RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 ITGA4P13612 1032 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 TUBGCP3Q96CW5 907 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 ZNF333Q96JL9 665 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 ZNF512Q96ME7 567 aaPredicted RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 ADGRE3Q9BY15 652 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 MRPS26Q9BYN8 205 aaKnown RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 CCDC90BQ9GZT6 254 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
FARP1-219ENST00000596580 CNOT7Q9UIV1 285 aaKnown RBP8.32□□□□□ -1.08
FARP1-219ENST00000596580 RPL10AP62906 217 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 RNF180Q86T96 592 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 VAT1Q99536 393 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 FBXO44Q9H4M3 255 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 AHSPQ9NZD4 102 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 PCSK1NQ9UHG2 260 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TMX2Q9Y320 296 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 C15orf38-AP3S2A0A0A6YYH1 394 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 KITP10721 976 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 THRAP10827 490 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 RARGP13631 454 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TAF6P49848 677 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 RBM43Q6ZSC3 357 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 ARPINQ7Z6K5 226 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CYP4Z1Q86W10 505 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 GJD4Q96KN9 370 aaPredicted RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SYTL2Q9HCH5 934 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SF3B1O75533 1304 aaKnown RBP eCLIP8.31□□□□□ -1.08
FARP1-219ENST00000596580 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 PI4K2BG5E9Z4 385 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 NR3C2P08235 984 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CUL2Q13617 745 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 HABP4Q5JVS0 413 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 P3H2Q8IVL5 708 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CAVIN3Q969G5 261 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 FAM124BQ9H5Z6 455 aaPredicted RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 IMPAD1Q9NX62 359 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TMEM114B3SHH9 223 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SUPT3HB4E1H0 165 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SERPINB3P29508 390 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CCZ1BP86790 482 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CCZ1P86791 482 aaPredicted RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 C8orf4Q9NR00 106 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TBC1D13Q9NVG8 400 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SALL1Q9NSC2 1324 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 GYPCP04921 128 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 MLNP12872 115 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ACCSLQ4AC99 568 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 EPHA10Q5JZY3 1008 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ZBTB41Q5SVQ8 909 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 PLA2G4FQ68DD2 849 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TTC30AQ86WT1 665 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TTC30BQ8N4P2 665 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ERP27Q96DN0 273 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 CINPQ9BW66 212 aaPredicted RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 PDGFCQ9NRA1 345 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 C21orf2O43822 256 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 RPN2P04844 631 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 USP10Q14694 798 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 TBC1D16Q8TBP0 767 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 SESN1Q9Y6P5 492 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 IMPDH2P12268 514 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 KYNUQ16719 465 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 DCLRE1BQ9H816 532 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 ERCC6L2Q5T890 1561 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 TTKP33981 857 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 SPDYAQ5MJ70 313 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 KLHDC7AQ5VTJ3 777 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 C1orf131Q8NDD1 294 aaKnown RBP8.31□□□□□ -1.08
FARP1-219ENST00000596580 CROCCQ5TZA2 2017 aa8.31□□□□□ -1.08
FARP1-219ENST00000596580 PPP2R1BP30154 601 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms