RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CSH1P0DML2 217 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 CSH2P0DML3 217 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 ADORA2BP29275 332 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 EPHA5P54756 1037 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 GET4Q7L5D6 327 aaPredicted RBP15.24■□□□□ 0.03
LIG1-208ENST00000595758 TDRD5Q8NAT2 981 aaKnown RBP15.24■□□□□ 0.03
LIG1-208ENST00000595758 ITFG1Q8TB96 612 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 ACSF2Q96CM8 615 aaPredicted RBP15.24■□□□□ 0.03
LIG1-208ENST00000595758 SMARCD1Q96GM5 515 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 C8orf48Q96LL4 319 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
LIG1-208ENST00000595758 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
LIG1-208ENST00000595758 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 TSPY26PQ9H489 355 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 KIAA1257Q9ULG3 409 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 DOCK6Q96HP0 2047 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 SLC38A8A6NNN8 435 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 LOC730098B7Z3J9 87 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 GOLGA6L19H0YKK7 550 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 FGF19O95750 216 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 PAEPP09466 180 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 FAM200BP0CF97 657 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 KRT5P13647 590 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 CD19P15391 556 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 GBP2P32456 591 aaPredicted RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 CACNA2D1P54289 1103 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 UBXN1Q04323 297 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 ARHGAP44Q17R89 818 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 ARHGAP17Q68EM7 881 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 GJD3Q8N144 294 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 RBBP8NLQ8NC74 664 aaPredicted RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 TCEAL4Q96EI5 215 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 MYADMQ96S97 322 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 LSM14BQ9BX40 385 aaKnown RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 ZNF334Q9HCZ1 680 aaPredicted RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 DMAP1Q9NPF5 467 aaPredicted RBP15.23■□□□□ 0.03
LIG1-208ENST00000595758 TMEM30AQ9NV96 361 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
LIG1-208ENST00000595758 UNC80Q8N2C7 3258 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 NCOR1O75376 2440 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 C2CD4DB7Z1M9 353 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 RNF225M0QZC1 329 aaPredicted RBP15.22■□□□□ 0.03
LIG1-208ENST00000595758 NOL4O94818 638 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 MICAL2O94851 1124 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 VDRP11473 427 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 HMGA1P17096 107 aaKnown RBP15.22■□□□□ 0.03
LIG1-208ENST00000595758 CCR2P41597 374 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 MTMR3Q13615 1198 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 PRSS36Q5K4E3 855 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 PPP1R26Q5T8A7 1209 aaPredicted RBP15.22■□□□□ 0.03
LIG1-208ENST00000595758 KLHDC7AQ5VTJ3 777 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 STKLD1Q8NE28 680 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 SHKBP1Q8TBC3 707 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 ING5Q8WYH8 240 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 FGF13Q92913 245 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 SMOQ99835 787 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 PLCB1Q9NQ66 1216 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 CDH7Q9ULB5 785 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 MAGED2Q9UNF1 606 aaPredicted RBP15.22■□□□□ 0.03
LIG1-208ENST00000595758 CNTN6Q9UQ52 1028 aa15.22■□□□□ 0.03
LIG1-208ENST00000595758 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
LIG1-208ENST00000595758 LAMP2P13473 410 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 CEBPBP17676 345 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 GABRR2P28476 465 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 USP8P40818 1118 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 ZNF132P52740 706 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 MAP3K7CLP57077 242 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 ZNF445P59923 1031 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 SYCP1Q15431 976 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 FILIP1LQ4L180 1135 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 DENND5BQ6ZUT9 1274 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 GAREM2Q75VX8 874 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 NPAS3Q8IXF0 933 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 ZDHHC14Q8IZN3 488 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 SHC3Q92529 594 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 TRMT2BQ96GJ1 504 aaKnown RBP15.21■□□□□ 0.03
LIG1-208ENST00000595758 MYRFLQ96LU7 910 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
LIG1-208ENST00000595758 GCNAQ96QF7 691 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 IL21Q9HBE4 155 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 CSNK1G1Q9HCP0 422 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 GDE1Q9NZC3 331 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms