RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZNF462Q96JM2 2506 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 TNRC6BQ9UPQ9 1833 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 ARHGAP33O14559 1287 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 CYB561D2O14569 222 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 PRPF40AO75400 957 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 CKMP06732 381 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 USP4Q13107 963 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 ORC2Q13416 577 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 PEAR1Q5VY43 1037 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 TMEM161BQ8NDZ6 487 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 CCDC26Q8TAB7 109 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 SPPL2BQ8TCT7 592 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 NTPCRQ9BSD7 190 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 PCDHB9Q9Y5E1 797 aa14.82□□□□□ -0.04
SHKBP1-208ENST00000595726 TRAV19A0A0A6YYK7 116 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 C2orf78A6NCI8 922 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 PIRO00625 290 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 USP17L7P0C7H9 530 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 MAPTP10636 758 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 MUTP22033 750 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 GJB2P29033 226 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 MRPS21P82921 87 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 ZXDBP98169 803 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 RPL6Q02878 288 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 C19orf57Q0VDD7 668 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 TTC38Q5R3I4 469 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 RINT1Q6NUQ1 792 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 ZPBP2Q6X784 338 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 C1orf186Q6ZWK4 172 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 METTL23Q86XA0 190 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 THEM5Q8N1Q8 247 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 CEP76Q8TAP6 659 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 DRC1Q96MC2 740 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 PYM1Q9BRP8 204 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 SCUBE2Q9NQ36 999 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 DNAAF2Q9NVR5 837 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 PCDHB5Q9Y5E4 795 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 GTF3C3Q9Y5Q9 886 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 DENND4CQ5VZ89 1909 aa14.81□□□□□ -0.04
SHKBP1-208ENST00000595726 TCRBV21S2A2A0A5A6 115 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 XPOTO43592 962 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 ADAM23O75077 832 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 C1QL1O75973 258 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 NFICP08651 508 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 CSH1P0DML2 217 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 CSH2P0DML3 217 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 CYP2F1P24903 491 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 ZNF33AQ06730 810 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 HNRNPDQ14103 355 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 SPDYCQ5MJ68 293 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 KCNK18Q7Z418 384 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 C2orf15Q8WU43 125 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 RPF1Q9H9Y2 349 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 POLMQ9NP87 494 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 GCNT4Q9P109 453 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 LRWD1Q9UFC0 647 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 NOL7Q9UMY1 257 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 DNM3Q9UQ16 869 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 ANK1P16157 1881 aa14.8□□□□□ -0.04
SHKBP1-208ENST00000595726 ANO9A1A5B4 782 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 PP2D1A8MPX8 630 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 AP5Z1O43299 807 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 FAM189A1O60320 539 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 GJB3O75712 270 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 NFATC1O95644 943 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 HDCP19113 662 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 CDC25AP30304 524 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 HOXD12P35452 270 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 CYP4F3Q08477 520 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 LMBRD2Q68DH5 695 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 TOGARAM2Q6ZUX3 1019 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 SLC41A1Q8IVJ1 513 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 NAXDQ8IW45 347 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 SNX29Q8TEQ0 813 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 ERLEC1Q96DZ1 483 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 BICD1Q96G01 975 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 PCDH15Q96QU1 1955 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 DSEQ9UL01 958 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 HECTD1Q9ULT8 2610 aa14.79□□□□□ -0.04
SHKBP1-208ENST00000595726 OBSL1O75147 1896 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 TSC2P49815 1807 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 ATMQ13315 3056 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 NOL4O94818 638 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 CYP17A1P05093 508 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 ADRB2P07550 413 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 DPP6P42658 865 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 KIR2DL1P43626 348 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 TOB1P50616 345 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 SMARCB1Q12824 385 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms