RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 CHFRQ96EP1 664 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 TRMT2BQ96GJ1 504 aaKnown RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 PCED1BQ96HM7 432 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 FUBP3Q96I24 572 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 SNX25Q9H3E2 840 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 DPEP3Q9H4B8 488 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 NXF1Q9UBU9 619 aaKnown RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 CFAP45Q9UL16 551 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 TRAV19A0A0A6YYK7 116 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 K7ESF4 209 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 HRO43593 1189 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 EXOC3O60645 756 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 CLSTN1O94985 981 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 MAGEA11P43364 429 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 MYL6P60660 151 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 TNNC1P63316 161 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 TRPC3Q13507 836 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 BMT2Q1RMZ1 405 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 MYCBPAPQ8TBZ2 947 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
CCDC9-202ENST00000595659 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 KIF9Q9HAQ2 790 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 FBRSL1Q9HCM7 1045 aaKnown RBP18.2■□□□□ 0.5
CCDC9-202ENST00000595659 POLR3BQ9NW08 1133 aaPredicted RBP18.2■□□□□ 0.5
CCDC9-202ENST00000595659 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 UBE4BO95155 1302 aa18.2■□□□□ 0.5
CCDC9-202ENST00000595659 PATJQ8NI35 1801 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 GVINP1Q7Z2Y8 2422 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 A0A1B0GVL5 298 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 ACTN4O43707 911 aaKnown RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 KLRC4O43908 158 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 PHACTR2O75167 634 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 USP17L7P0C7H9 530 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 PXNP49023 591 aaPredicted RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 SNRPFP62306 86 aaKnown RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 FAM160A1Q05DH4 1040 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 STK4Q13043 487 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 MTF1Q14872 753 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 RSPO4Q2I0M5 234 aaPredicted RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 FSTL4Q6MZW2 842 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 DUS2Q9NX74 493 aaKnown RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 RAB23Q9ULC3 237 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
CCDC9-202ENST00000595659 EP300Q09472 2414 aaPredicted RBP18.19■□□□□ 0.5
CCDC9-202ENST00000595659 GPR179Q6PRD1 2367 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 F5P12259 2224 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 F8VP50 259 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 EGFP01133 1207 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 PTPN1P18031 435 aaKnown RBP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 HDCP19113 662 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 ANXA13P27216 316 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 GALK1P51570 392 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 CACNA2D1P54289 1103 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 CDH8P55286 799 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 SIM2Q14190 667 aaPredicted RBP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 ZNF268Q14587 947 aaPredicted RBP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 PDGFRLQ15198 375 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 MAPRE1Q15691 268 aaKnown RBP18.18■□□□□ 0.5
CCDC9-202ENST00000595659 ZNF77Q15935 545 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 KMT5BQ4FZB7 885 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 TMEM196Q5HYL7 178 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 DENND5BQ6ZUT9 1274 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 FSIP1Q8NA03 581 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 KIAA0895Q8NCT3 520 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 SH3RF2Q8TEC5 729 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 LINC00597Q9H2U6 94 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 PARD6AQ9NPB6 346 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 GMEB2Q9UKD1 530 aa18.18■□□□□ 0.5
CCDC9-202ENST00000595659 SOBPA7XYQ1 873 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 CLDN5O00501 218 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 TACC1O75410 805 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 ABL1P00519 1130 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 PFKFB1P16118 471 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 GJA4P35212 333 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 RAP1GAPP47736 663 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 IFNAR2P48551 515 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 SPEM2Q0P670 501 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 IFRD2Q12894 506 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-202ENST00000595659 BIRC3Q13489 604 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 KCNB1Q14721 858 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 ERMP1Q7Z2K6 904 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 LONP2Q86WA8 852 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 OSCP1Q8WVF1 389 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 SPATA17Q96L03 361 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 ZNF518BQ9C0D4 1074 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 XYLT2Q9H1B5 865 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 SMYD3Q9H7B4 428 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms