RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
SHKBP1-207ENST00000595631 TAB2Q9NYJ8 693 aa14.66□□□□□ -0.06
SHKBP1-207ENST00000595631 CDH7Q9ULB5 785 aa14.66□□□□□ -0.06
SHKBP1-207ENST00000595631 ASB3Q9Y575 518 aa14.66□□□□□ -0.06
SHKBP1-207ENST00000595631 F8VP50 259 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 CALCAP01258 141 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 SLC9A1P19634 815 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 GABRR2P28476 465 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 ADORA2BP29275 332 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 USP46P62068 366 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 CYP4F8P98187 520 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 MYL5Q02045 173 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 CETN1Q12798 172 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 NCAPHQ15003 741 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 TAF12Q16514 161 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 VWA3BQ502W6 1294 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 PHLDB3Q6NSJ2 640 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 VSTM1Q6UX27 236 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 GAREM2Q75VX8 874 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 ITIH5Q86UX2 942 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 SLC4A11Q8NBS3 891 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 ZSWIM3Q96MP5 696 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 KREMEN1Q96MU8 473 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 EPS15L1Q9UBC2 864 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 TTC28Q96AY4 2481 aa14.65□□□□□ -0.06
SHKBP1-207ENST00000595631 TICRRQ7Z2Z1 1910 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 BEST1O76090 585 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 NOL4O94818 638 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 ACO1P21399 889 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 TBXAS1P24557 533 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 KRT31Q15323 416 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 TRIM65Q6PJ69 517 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 PARM1Q6UWI2 310 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 GBP6Q6ZN66 633 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 TMEM150AQ86TG1 271 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 GPIHBP1Q8IV16 184 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 CYFIP2Q96F07 1278 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 FAXDC2Q96IV6 333 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 HEXIM2Q96MH2 286 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 RPP25Q9BUL9 199 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 NDST4Q9H3R1 872 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 EPHX3Q9H6B9 360 aa14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 AJAP1Q9UKB5 411 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-207ENST00000595631 COL4A3Q01955 1670 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 RNF225M0QZC1 329 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 PES1O00541 588 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ZNF197O14709 1029 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 TRIM66O15016 1216 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 TADA3O75528 432 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 AP1G2O75843 785 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 CSH1P0DML2 217 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 CSH2P0DML3 217 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 EEF1GP26641 437 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 PON1P27169 355 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ANXA13P27216 316 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 IFRD2Q12894 506 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 HTR4Q13639 388 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 PTPN21Q16825 1174 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ZSCAN23Q3MJ62 389 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 PPP1R26Q5T8A7 1209 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 DHX40Q8IX18 779 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 LEMD2Q8NC56 503 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ZMIZ2Q8NF64 920 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 FGF14Q92915 247 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 JAKMIP2Q96AA8 810 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 SMARCD1Q96GM5 515 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 TMEM176AQ96HP8 235 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 C8orf48Q96LL4 319 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 SMOQ99835 787 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 KXD1Q9BQD3 176 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 VPS16Q9H269 839 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 KCNK12Q9HB15 430 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 SIX2Q9NPC8 291 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 UBE2TQ9NPD8 197 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 PCDHB4Q9Y5E5 795 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 NUMBLQ9Y6R0 609 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 ATP8B3O60423 1300 aa14.63□□□□□ -0.07
SHKBP1-207ENST00000595631 A0A0C4DFX4 3053 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 ANHXE9PGG2 379 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 LETM1O95202 739 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 F11P03951 625 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 COL4A2P08572 1712 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 MAP3K7CLP57077 242 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 FAM78AQ5JUQ0 283 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 GPR158Q5T848 1215 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 TMEM270Q6UE05 265 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 DENND5BQ6ZUT9 1274 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 TTC39CQ8N584 583 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 SPATA17Q96L03 361 aa14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 DMAP1Q9NPF5 467 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-207ENST00000595631 NCANO14594 1321 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms