RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 TBX2Q13207 712 aaPredicted RBP23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 DDR2Q16832 855 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 SYCE2Q6PIF2 218 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 LCLAT1Q6UWP7 414 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 TTC30AQ86WT1 665 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 C12orf76Q8N812 135 aaPredicted RBP23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 SMARCD1Q96GM5 515 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 KCNK16Q96T55 309 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 SMOQ99835 787 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 KRT82Q9NSB4 513 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 DZANK1Q9NVP4 752 aa23.9■■□□□ 1.42
SNRNP70-204ENST00000595231 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 HOXA9P31269 272 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 TWF1Q12792 350 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 PKDCCQ504Y2 493 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 PPM1LQ5SGD2 360 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 E4F1Q66K89 784 aaPredicted RBP23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 CLEC20AQ6ZU45 233 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 TMC6Q7Z403 805 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 IRF2BP2Q7Z5L9 587 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 ANKRD52Q8NB46 1076 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 ZMIZ2Q8NF64 920 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 DDX1Q92499 740 aaKnown RBP23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 MSLNLQ96KJ4 702 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 DUSP16Q9BY84 665 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 ZDHHC7Q9NXF8 308 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 AIPL1Q9NZN9 384 aa23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 LUC7L2Q9Y383 392 aaKnown RBP23.89■■□□□ 1.42
SNRNP70-204ENST00000595231 MYH10P35580 1976 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 CCDC195A0A1B0GUA6 201 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 THAP12O43422 761 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 AP1G2O75843 785 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 CFHP08603 1231 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 SRGAP2BP0DMP2 458 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 SSTR3P32745 418 aaPredicted RBP23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 GRIK1P39086 918 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 ZBED6P86452 979 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 STILQ15468 1287 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 GOLGA7BQ2TAP0 167 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 ELMSAN1Q6PJG2 1045 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 SCN4BQ8IWT1 228 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 EPS8L1Q8TE68 723 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 ZNF707Q96C28 371 aaPredicted RBP23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 ATP8B3O60423 1300 aa23.89■■□□□ 1.41
SNRNP70-204ENST00000595231 F8VP50 259 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 HNRNPA1P09651 372 aaKnown RBP eCLIP23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 FAM200BP0CF97 657 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 ALDH1A3P47895 512 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 ARID5AQ03989 594 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 TRIM14Q14142 442 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 SDHAF4Q5VUM1 108 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 EP400NLQ6ZTU2 488 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 NOP9Q86U38 636 aaKnown RBP23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 C8orf48Q96LL4 319 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 SFXN1Q9H9B4 322 aa23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 NOCTQ9UK39 431 aaKnown RBP23.88■■□□□ 1.41
SNRNP70-204ENST00000595231 MICAL2O94851 1124 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 NPR3P17342 541 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 HOXB8P17481 243 aaPredicted RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 MAP3K7CLP57077 242 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 RPL10AP62906 217 aaKnown RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 ZNF397Q8NF99 534 aaPredicted RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 CMASQ8NFW8 434 aaPredicted RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 MAFAQ8NHW3 353 aaPredicted RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 GPR152Q8TDT2 470 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 PRKD2Q9BZL6 878 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 S1PR5Q9H228 398 aa23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 DMAP1Q9NPF5 467 aaPredicted RBP23.87■■□□□ 1.41
SNRNP70-204ENST00000595231 TRIM66O15016 1216 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 CCL16O15467 120 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 MED7O43513 233 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 LRG1P02750 347 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 FERP16591 822 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 KRT9P35527 623 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SKIV2LQ15477 1246 aaKnown RBP23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SFMBT2Q5VUG0 894 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 TMC5Q6UXY8 1006 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 UBA3Q8TBC4 463 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SPATA17Q96L03 361 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 NUCKS1Q9H1E3 243 aaKnown RBP23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 UBE2ZQ9H832 354 aaPredicted RBP23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 PCDHGC3Q9UN70 934 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 C5orf42Q9H799 3197 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 DOCK6Q96HP0 2047 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SPDYE4A6NLX3 237 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 HHLA1C9JL84 531 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 CDC25BP30305 580 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 PDE6CP51160 858 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 PDE4CQ08493 712 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 GSE1Q14687 1217 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 STKLD1Q8NE28 680 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 GIPC2Q8TF65 315 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SLC20A1Q8WUM9 679 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 SYN2Q92777 582 aaPredicted RBP23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 HESX1Q9UBX0 185 aa23.86■■□□□ 1.41
SNRNP70-204ENST00000595231 TULP2O00295 520 aa23.85■■□□□ 1.41
SNRNP70-204ENST00000595231 POU2F2P09086 479 aa23.85■■□□□ 1.41
SNRNP70-204ENST00000595231 CHRNB2P17787 502 aa23.85■■□□□ 1.41
SNRNP70-204ENST00000595231 BCAT1P54687 386 aa23.85■■□□□ 1.41
SNRNP70-204ENST00000595231 EPHB3P54753 998 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms