RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 CPA6Q8N4T0 437 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 ARL14EPQ8N8R7 260 aaPredicted RBP17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 SPATA17Q96L03 361 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 CRTAC1Q9NQ79 661 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 RXFP3Q9NSD7 469 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
GTF2F1-203ENST00000594213 TRAV19A0A0A6YYK7 116 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 C2orf78A6NCI8 922 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 ZXDBP98169 803 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 PLK5Q496M5 336 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 SYT13Q7L8C5 426 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 SH3RF2Q8TEC5 729 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 CEP295NLQ96MC4 621 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 SYT15Q9BQS2 421 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 TRPC7Q9HCX4 862 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 EBF1Q9UH73 591 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 CDH9Q9ULB4 789 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 PCDHGA5Q9Y5G8 931 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 MAP1BP46821 2468 aaKnown RBP17.03■□□□□ 0.32
GTF2F1-203ENST00000594213 LAMA1P25391 3075 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 ZNF233A6NK53 670 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 CKMP06732 381 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 WARSP23381 471 aaKnown RBP17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 MYO1EQ12965 1108 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 CCDC6Q16204 474 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 E2F4Q16254 413 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 GAB4Q2WGN9 574 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 C4orf50Q6ZRC1 276 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 CD101Q93033 1021 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 ATP2A3Q93084 1043 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 HPS3Q969F9 1004 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 ANKRD36BP1Q96IX9 119 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 TTLL2Q9BWV7 592 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 DUSP15Q9H1R2 295 aaPredicted RBP17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 MAGEC2Q9UBF1 373 aaPredicted RBP17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 NME7Q9Y5B8 376 aa17.02■□□□□ 0.32
GTF2F1-203ENST00000594213 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 KRT37O76014 449 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 FAM163BP0C2L3 166 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 PFKLP17858 780 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 HDCP19113 662 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 BDNFP23560 247 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 IFNAR2P48551 515 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 USP46P62068 366 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 PSMC1P62191 440 aaKnown RBP17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 SURF1Q15526 300 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 CNNM4Q6P4Q7 775 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 RPLP0P6Q8NHW5 317 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
GTF2F1-203ENST00000594213 CEP295Q9C0D2 2601 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 TGFB1I1O43294 461 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
GTF2F1-203ENST00000594213 TNNC2P02585 160 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 PDGFRBP09619 1106 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 OPRD1P41143 372 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 DMC1Q14565 340 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 MAPRE1Q15691 268 aaKnown RBP17■□□□□ 0.31
GTF2F1-203ENST00000594213 AASDHQ4L235 1098 aaPredicted RBP17■□□□□ 0.31
GTF2F1-203ENST00000594213 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 WDR49Q8IV35 697 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 PDILTQ8N807 584 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 KIAA1958Q8N8K9 716 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 MYCBPAPQ8TBZ2 947 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 ZNF507Q8TCN5 953 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 NOC3LQ8WTT2 800 aaKnown RBP17■□□□□ 0.31
GTF2F1-203ENST00000594213 TRIM9Q9C026 710 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 TNMDQ9H2S6 317 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 HSPBP1Q9NZL4 362 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 USP24Q9UPU5 2620 aa17■□□□□ 0.31
GTF2F1-203ENST00000594213 ZNF840PA6NDX5 716 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 K7EQS6 105 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 DCLK1O15075 740 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 EIF3DO15371 548 aaKnown RBP eCLIP16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 TACC1O75410 805 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 APBB3O95704 486 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 OLFM2O95897 454 aa16.99■□□□□ 0.31
GTF2F1-203ENST00000594213 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms