RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 OR10T2Q8NGX3 314 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 MYCBPAPQ8TBZ2 947 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
VRK3-207ENST00000594092 STK32AQ8WU08 396 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 ZNF689Q96CS4 500 aaPredicted RBP16.03■□□□□ 0.16
VRK3-207ENST00000594092 SLC4A5Q9BY07 1137 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 B3GNT5Q9BYG0 378 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 CWH43Q9H720 699 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 WDR35Q9P2L0 1181 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
VRK3-207ENST00000594092 NT5C1B-RDH14C9J2C7 533 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 E5RJQ4 531 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 ZNF185O15231 689 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 PPIGQ13427 754 aaKnown RBP eCLIP16.02■□□□□ 0.163e-6■■■■□ 22
VRK3-207ENST00000594092 NAA30Q147X3 362 aaPredicted RBP16.02■□□□□ 0.16
VRK3-207ENST00000594092 ERCC6LQ2NKX8 1250 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 INTS6LQ5JSJ4 861 aaKnown RBP16.02■□□□□ 0.16
VRK3-207ENST00000594092 FAM117BQ6P1L5 589 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 THEM5Q8N1Q8 247 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 BADQ92934 168 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 MCRS1Q96EZ8 462 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 PCED1BQ96HM7 432 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 RPGRIP1Q96KN7 1286 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 PSMB7Q99436 277 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 PKMYT1Q99640 499 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 DUSP16Q9BY84 665 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 GPR62Q9BZJ7 368 aa16.02■□□□□ 0.16
VRK3-207ENST00000594092 RC3H2Q9HBD1 1191 aaKnown RBP16.02■□□□□ 0.16
VRK3-207ENST00000594092 TMEM191CA6NGB0 347 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 GOLGA8SH3BPF8 625 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 MYO1FO00160 1098 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 SYN3O14994 580 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 GABBR2O75899 941 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 OAZ2O95190 189 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 COMTP21964 271 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 CXCR5P32302 372 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 DNA2P51530 1060 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 CDR1P51861 262 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 RPL7AP62424 266 aaKnown RBP16.01■□□□□ 0.15
VRK3-207ENST00000594092 ELF2Q15723 593 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 FAM171BQ6P995 826 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 RSRC2Q7L4I2 434 aaKnown RBP16.01■□□□□ 0.15
VRK3-207ENST00000594092 TMEM110Q86TL2 294 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 TMEM173Q86WV6 379 aaPredicted RBP16.01■□□□□ 0.15
VRK3-207ENST00000594092 CPNE8Q86YQ8 564 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 C7orf61Q8IZ16 206 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 COG1Q8WTW3 980 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 HES6Q96HZ4 224 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 TMEM209Q96SK2 561 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 MED10Q9BTT4 135 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 MIS12Q9H081 205 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.153e-6■■■■■ 137.9
VRK3-207ENST00000594092 PIK3R2O00459 728 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 NPR3P17342 541 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 PAFAH1B1P43034 410 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 RPL34P49207 117 aaKnown RBP16.01■□□□□ 0.15
VRK3-207ENST00000594092 FPGSQ05932 587 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 FAM171A1Q5VUB5 890 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 FAM35AQ86V20 835 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 LRRTM3Q86VH5 581 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 CREG2Q8IUH2 290 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 BCL7CQ8WUZ0 217 aaPredicted RBP16.01■□□□□ 0.15
VRK3-207ENST00000594092 MYLPFQ96A32 169 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 RNF14Q9UBS8 474 aa16.01■□□□□ 0.15
VRK3-207ENST00000594092 SIGLEC16A6NMB1 481 aa16■□□□□ 0.15
VRK3-207ENST00000594092 CES2O00748 559 aa16■□□□□ 0.15
VRK3-207ENST00000594092 XPO1O14980 1071 aaKnown RBP16■□□□□ 0.15
VRK3-207ENST00000594092 CAPN15O75808 1086 aa16■□□□□ 0.15
VRK3-207ENST00000594092 PROSCO94903 275 aa16■□□□□ 0.15
VRK3-207ENST00000594092 FAM200BP0CF97 657 aa16■□□□□ 0.15
VRK3-207ENST00000594092 PLA2G4AP47712 749 aa16■□□□□ 0.15
VRK3-207ENST00000594092 TSPY1Q01534 308 aa16■□□□□ 0.15
VRK3-207ENST00000594092 TAP1Q03518 808 aa16■□□□□ 0.15
VRK3-207ENST00000594092 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
VRK3-207ENST00000594092 DCUN1D2Q6PH85 259 aa16■□□□□ 0.15
VRK3-207ENST00000594092 CLEC20AQ6ZU45 233 aa16■□□□□ 0.15
VRK3-207ENST00000594092 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
VRK3-207ENST00000594092 ZNF365Q70YC5 407 aa16■□□□□ 0.15
VRK3-207ENST00000594092 CYLDQ9NQC7 956 aa16■□□□□ 0.15
VRK3-207ENST00000594092 KRT82Q9NSB4 513 aa16■□□□□ 0.15
VRK3-207ENST00000594092 TMLHEQ9NVH6 421 aa16■□□□□ 0.15
VRK3-207ENST00000594092 VWA8A3KMH1 1905 aa16■□□□□ 0.15
VRK3-207ENST00000594092 KCNK3O14649 394 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 BEST1O76090 585 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 FGBP02675 491 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 KRT3P12035 628 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 FGFR3P22607 806 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 ALDH7A1P49419 539 aaKnown RBP15.99■□□□□ 0.15
VRK3-207ENST00000594092 SLC8A3P57103 927 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 ELAVL2Q12926 359 aaKnown RBP15.99■□□□□ 0.15
VRK3-207ENST00000594092 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 OR6B2Q6IFH4 312 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms