RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HSD3B7Q9H2F3 369 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 HCFC1R1Q9NWW0 138 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 CEP72Q9P209 647 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 DNMT3BQ9UBC3 853 aaKnown RBP20.85■□□□□ 0.93
LSM4-203ENST00000593829 A0A0C4DFX4 3053 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 C2orf16Q68DN1 1984 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 TRIM21P19474 475 aaKnown RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 CYP2F1P24903 491 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CUL2Q13617 745 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 ERCC6LQ2NKX8 1250 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CDKAL1Q5VV42 579 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 ACOT1Q86TX2 421 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 RPGRIP1Q96KN7 1286 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 DNAI2Q9GZS0 605 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 HMGXB4Q9UGU5 601 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 NR2E1Q9Y466 385 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 ASB3Q9Y575 518 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 FHOD1Q9Y613 1164 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CILPO75339 1184 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 ZRANB2O95218 330 aaKnown RBP eCLIP20.84■□□□□ 0.933e-6■■■■■ 27.8
LSM4-203ENST00000593829 TBXAS1P24557 533 aaPredicted RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 NTHL1P78549 312 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 PABPC1LQ4VXU2 614 aaKnown RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 VWA3BQ502W6 1294 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CRYBG2Q8N1P7 616 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 NECAB3Q96P71 396 aaPredicted RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 LPIN3Q9BQK8 851 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CORO1BQ9BR76 489 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 NT5C1AQ9BXI3 368 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 INTS2Q9H0H0 1204 aaKnown RBP20.84■□□□□ 0.93
LSM4-203ENST00000593829 NDST4Q9H3R1 872 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 CISHQ9NSE2 258 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 GCNT4Q9P109 453 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 USTQ9Y2C2 406 aa20.84■□□□□ 0.93
LSM4-203ENST00000593829 MAGEA11P43364 429 aa20.83■□□□□ 0.93
LSM4-203ENST00000593829 CLCN6P51797 869 aa20.83■□□□□ 0.93
LSM4-203ENST00000593829 RPL10AP62906 217 aaKnown RBP20.83■□□□□ 0.93
LSM4-203ENST00000593829 VEPH1Q14D04 833 aa20.83■□□□□ 0.93
LSM4-203ENST00000593829 TRIM65Q6PJ69 517 aa20.83■□□□□ 0.93
LSM4-203ENST00000593829 ITIH5Q86UX2 942 aa20.83■□□□□ 0.93
LSM4-203ENST00000593829 GTPBP10A4D1E9 387 aaKnown RBP20.82■□□□□ 0.92
LSM4-203ENST00000593829 C19orf67A6NJJ6 358 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 RHOP08100 348 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 ATF6P18850 670 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 FSHRP23945 695 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 YWHAEP62258 255 aaKnown RBP20.82■□□□□ 0.92
LSM4-203ENST00000593829 ORC1Q13415 861 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 MIIPQ5JXC2 388 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 VSTM1Q6UX27 236 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 GBP6Q6ZN66 633 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 OTOP3Q7RTS5 596 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 WHAMMQ8TF30 809 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 CRACR2AQ9BSW2 395 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 B3GNT5Q9BYG0 378 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 DNAI1Q9UI46 699 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 GOLGA6L9A6NEM1 432 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 LOC730098B7Z3J9 87 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 SP100P23497 879 aaPredicted RBP20.82■□□□□ 0.92
LSM4-203ENST00000593829 BDNFP23560 247 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 VSTM4Q8IW00 320 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 PPM1KQ8N3J5 372 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 LEMD2Q8NC56 503 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 PSMG2Q969U7 264 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 ACSF2Q96CM8 615 aaPredicted RBP20.82■□□□□ 0.92
LSM4-203ENST00000593829 TWNKQ96RR1 684 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 ELOVL4Q9GZR5 314 aa20.82■□□□□ 0.92
LSM4-203ENST00000593829 AVENQ9NQS1 362 aaPredicted RBP20.82■□□□□ 0.92
LSM4-203ENST00000593829 EFCAB8A8MWE9 144 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 ZSCAN12O43309 604 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 SSTR3P32745 418 aaPredicted RBP20.81■□□□□ 0.92
LSM4-203ENST00000593829 EXOC3L4Q17RC7 722 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 CYP4A22Q5TCH4 519 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 DNAJB7Q7Z6W7 309 aaPredicted RBP20.81■□□□□ 0.92
LSM4-203ENST00000593829 SCN4BQ8IWT1 228 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 REXO1L1PQ8IX06 675 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 GJD3Q8N144 294 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 TDRD5Q8NAT2 981 aaKnown RBP20.81■□□□□ 0.92
LSM4-203ENST00000593829 GIPC2Q8TF65 315 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 ASAH2Q9NR71 780 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.81■□□□□ 0.92
LSM4-203ENST00000593829 VCANP13611 3396 aa20.81■□□□□ 0.92
LSM4-203ENST00000593829 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 TADA3O75528 432 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 PNMA6AP0CW24 399 aaPredicted RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 GRIK1P39086 918 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 GCNT1Q02742 428 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 TAF12Q16514 161 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 DDR2Q16832 855 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 ARHGAP29Q52LW3 1261 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 PDZD4Q76G19 769 aaPredicted RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 GET4Q7L5D6 327 aaPredicted RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 HS6ST3Q8IZP7 471 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 ANKRD20A12PQ8NF67 263 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 UBXN4Q92575 508 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 TAB2Q9NYJ8 693 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 DENND4AQ7Z401 1863 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 ATP8B3O60423 1300 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 C2CD4DB7Z1M9 353 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms