RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 SLC35F5Q8WV83 523 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 LPIN3Q9BQK8 851 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.113e-8■■■■■ 30.2
GTF2F1-202ENST00000593678 COLEC11Q9BWP8 271 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 TRIM7Q9C029 511 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 CYLDQ9NQC7 956 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 METTL5Q9NRN9 209 aaKnown RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 PCDHA3Q9Y5H8 950 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 TTC3P53804 2025 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 ATP2C2O75185 946 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 GJB6O95452 261 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 TIMP1P01033 207 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 PFKMP08237 780 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 NPR3P17342 541 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 PSMA2P25787 234 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 RNASE9P60153 205 aaKnown RBP15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 PLCB3Q01970 1234 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 ZFYVE27Q5T4F4 411 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 RSRC2Q7L4I2 434 aaKnown RBP15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 RHOT1Q8IXI2 618 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 TMEM199Q8N511 208 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 SPATA4Q8NEY3 305 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 MCRS1Q96EZ8 462 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 HSFY1Q96LI6 401 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 CASD1Q96PB1 797 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 SLC4A5Q9BY07 1137 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 DUSP16Q9BY84 665 aa15.71■□□□□ 0.11
GTF2F1-202ENST00000593678 GOLGA6L10A0A0M3HER8 536 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 TCRBV5S1A1TA0A578 114 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 PIK3R2O00459 728 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 XPO1O14980 1071 aaKnown RBP15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 PSTPIP1O43586 416 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 UPP2O95045 317 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 CETN2P41208 172 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 PLA2G4AP47712 749 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 C2orf54Q08AI8 447 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 PPP1R15BQ5SWA1 713 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 ZNF572Q7Z3I7 529 aaPredicted RBP15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 TMEM110Q86TL2 294 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 GPR161Q8N6U8 529 aaKnown RBP15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 FNIP1Q8TF40 1166 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 CD101Q93033 1021 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 KRT82Q9NSB4 513 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 TJP2Q9UDY2 1190 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 DNAJB4Q9UDY4 337 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 PRKAG2Q9UGJ0 569 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 FAN1Q9Y2M0 1017 aa15.71■□□□□ 0.1
GTF2F1-202ENST00000593678 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 PDE2AO00408 941 aaPredicted RBP15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 EFCAB14O75071 495 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 RNF8O76064 485 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 AMHP03971 560 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 ITGB1P05556 798 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 RFC1P35251 1148 aaPredicted RBP15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 ELAVL2Q12926 359 aaKnown RBP15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 LONRF2Q1L5Z9 754 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 TCTN1Q2MV58 587 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 FAM183BPQ6ZVS7 135 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 FUKQ8N0W3 1084 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 TSC1Q92574 1164 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 KRT35Q92764 455 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 PCED1BQ96HM7 432 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 TMEM175Q9BSA9 504 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 NRDE2Q9H7Z3 1164 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 LRRC4Q9HBW1 653 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 CRTAC1Q9NQ79 661 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 SMARCAL1Q9NZC9 954 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 EHD2Q9NZN4 543 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 ADAM28Q9UKQ2 775 aa15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 SF3B1O75533 1304 aaKnown RBP eCLIP15.7■□□□□ 0.1
GTF2F1-202ENST00000593678 MICAL3Q7RTP6 2002 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 KRIT1O00522 736 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 NRP1O14786 923 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 SYN3O14994 580 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 AP1G2O75843 785 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 FGGP02679 453 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 LCP1P13796 627 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 TKTP29401 623 aaKnown RBP15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 SLC6A3Q01959 620 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 ACAP1Q15027 740 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 HADHQ16836 314 aaKnown RBP15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 CC2D1AQ6P1N0 951 aaPredicted RBP15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 FAM35AQ86V20 835 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 SCUBE3Q8IX30 993 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 SIX6OS1Q8N1H7 587 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 RASGEF1CQ8N431 466 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 NIPA2Q8N8Q9 360 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 ALG3Q92685 438 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 SMARCD1Q96GM5 515 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 ARGLU1Q9NWB6 273 aaPredicted RBP15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 ASNSD1Q9NWL6 643 aa15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 TTC7AQ9ULT0 858 aaPredicted RBP15.69■□□□□ 0.1
GTF2F1-202ENST00000593678 MYBPHLA2RUH7 354 aa15.68■□□□□ 0.1
GTF2F1-202ENST00000593678 TULP2O00295 520 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms