RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TPRP12270 2363 aaKnown RBP25.61■■□□□ 1.69
LSM4-202ENST00000593564 EIF3DO15371 548 aaKnown RBP eCLIP25.6■■□□□ 1.69
LSM4-202ENST00000593564 RNF40O75150 1001 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 PPP6R2O75170 966 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 ATP2C2O75185 946 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 LMO2P25791 158 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 GJA4P35212 333 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 HOXD13P35453 343 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 GALK1P51570 392 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 MAPRE1Q15691 268 aaKnown RBP25.6■■□□□ 1.69
LSM4-202ENST00000593564 FBXO43Q4G163 708 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 VSTM1Q6UX27 236 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 GAB3Q8WWW8 586 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 SPATA17Q96L03 361 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 CEP295NLQ96MC4 621 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 P2RY13Q9BPV8 354 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 ECT2Q9H8V3 914 aa25.6■■□□□ 1.69
LSM4-202ENST00000593564 FBRSL1Q9HCM7 1045 aaKnown RBP25.6■■□□□ 1.69
LSM4-202ENST00000593564 DUS2Q9NX74 493 aaKnown RBP25.6■■□□□ 1.69
LSM4-202ENST00000593564 MAGEC2Q9UBF1 373 aaPredicted RBP25.6■■□□□ 1.69
LSM4-202ENST00000593564 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.59■■□□□ 1.69
LSM4-202ENST00000593564 SPTLC2O15270 562 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 WARSP23381 471 aaKnown RBP25.59■■□□□ 1.69
LSM4-202ENST00000593564 PXNP49023 591 aaPredicted RBP25.59■■□□□ 1.69
LSM4-202ENST00000593564 PSMC1P62191 440 aaKnown RBP25.59■■□□□ 1.69
LSM4-202ENST00000593564 AMPD3Q01432 767 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 CNNM4Q6P4Q7 775 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 EPM2AIP1Q7L775 607 aaPredicted RBP25.59■■□□□ 1.69
LSM4-202ENST00000593564 ATP2A3Q93084 1043 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 MYLPFQ96A32 169 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 CRTAC1Q9NQ79 661 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 FOXD4L1Q9NU39 408 aa25.59■■□□□ 1.69
LSM4-202ENST00000593564 RPP40O75818 363 aaKnown RBP25.58■■□□□ 1.69
LSM4-202ENST00000593564 TCF3P15923 654 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 IFNAR2P48551 515 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 NAIF1Q69YI7 327 aaPredicted RBP25.58■■□□□ 1.69
LSM4-202ENST00000593564 CACNA2D4Q7Z3S7 1137 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 CAMKK1Q8N5S9 505 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 ARL14EPQ8N8R7 260 aaPredicted RBP25.58■■□□□ 1.69
LSM4-202ENST00000593564 ZNF507Q8TCN5 953 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 LOXL4Q96JB6 756 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 ARHGAP26Q9UNA1 814 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 WNT6Q9Y6F9 365 aa25.58■■□□□ 1.69
LSM4-202ENST00000593564 C2orf78A6NCI8 922 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 K7ELQ4 463 aaPredicted RBP25.57■■□□□ 1.68
LSM4-202ENST00000593564 AKAP3O75969 853 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 PDE6CP51160 858 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 ASIC1P78348 528 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 KCNB1Q14721 858 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 SNRNP35Q16560 246 aaKnown RBP25.57■■□□□ 1.68
LSM4-202ENST00000593564 EML3Q32P44 896 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 FAM26FQ5R3K3 315 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 TRAPPC11Q7Z392 1133 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 IQUBQ8NA54 791 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 SH3RF2Q8TEC5 729 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 DHX58Q96C10 678 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 AGPAT3Q9NRZ7 376 aa25.57■■□□□ 1.68
LSM4-202ENST00000593564 SDK1Q7Z5N4 2213 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 TGFB1I1O43294 461 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 PFKLP17858 780 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 HDCP19113 662 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 BDNFP23560 247 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 RAP1GAPP47736 663 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 TTC16Q8NEE8 873 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 MYCBPAPQ8TBZ2 947 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 CD101Q93033 1021 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 ZNF396Q96N95 335 aaPredicted RBP25.56■■□□□ 1.68
LSM4-202ENST00000593564 MMS19Q96T76 1030 aa25.56■■□□□ 1.68
LSM4-202ENST00000593564 EPG5Q9HCE0 2579 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 ACACBO00763 2458 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 GDF9O60383 454 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 YEATS4O95619 227 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 PDGFRBP09619 1106 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 GRIK1P39086 918 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 SNRPFP62306 86 aaKnown RBP25.55■■□□□ 1.68
LSM4-202ENST00000593564 CYP27A1Q02318 531 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 DENND5BQ6ZUT9 1274 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 KBTBD6Q86V97 674 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 PCED1BQ96HM7 432 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 CGRRF1Q99675 332 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 C7orf25Q9BPX7 421 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 TTLL2Q9BWV7 592 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 POLR3BQ9NW08 1133 aaPredicted RBP25.55■■□□□ 1.68
LSM4-202ENST00000593564 EHD2Q9NZN4 543 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 TFIP11Q9UBB9 837 aaKnown RBP25.55■■□□□ 1.68
LSM4-202ENST00000593564 UBE4BO95155 1302 aa25.55■■□□□ 1.68
LSM4-202ENST00000593564 RALGAPA1Q6GYQ0 2036 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 TRIM66O15016 1216 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 AXIN1O15169 862 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 CUTAO60888 179 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 TACC1O75410 805 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 EPN2O95208 641 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 FAM163BP0C2L3 166 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 CCDC192P0DO97 292 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 DLATP10515 647 aaKnown RBP25.54■■□□□ 1.68
LSM4-202ENST00000593564 ANXA13P27216 316 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 EHHADHQ08426 723 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 NR1H3Q13133 447 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 PSMD6Q15008 389 aa25.54■■□□□ 1.68
LSM4-202ENST00000593564 SHC4Q6S5L8 630 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms