RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LIMK1P53667 647 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 PSMC1P62191 440 aaKnown RBP17.53■□□□□ 0.4
LIG1-205ENST00000593425 ALCAMQ13740 583 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 EML3Q32P44 896 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 FAM171BQ6P995 826 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 CCDC73Q6ZRK6 1079 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 CAMKK1Q8N5S9 505 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
LIG1-205ENST00000593425 C12orf50Q8NA57 414 aaPredicted RBP17.53■□□□□ 0.4
LIG1-205ENST00000593425 GLIS3Q8NEA6 775 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 OR5B17Q8NGF7 314 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 KBTBD7Q8WVZ9 684 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 CD101Q93033 1021 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 FUBP3Q96I24 572 aaKnown RBP eCLIP17.53■□□□□ 0.4
LIG1-205ENST00000593425 INTS13Q9NVM9 706 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 TM4SF5O14894 197 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 AKAP3O75969 853 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 LMO2P25791 158 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 FBXO43Q4G163 708 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 PLA2G2CQ5R387 149 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 IL31Q6EBC2 164 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 LIMS2Q7Z4I7 341 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 HPS3Q969F9 1004 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 MYLPFQ96A32 169 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 ZC3H10Q96K80 434 aaKnown RBP17.52■□□□□ 0.4
LIG1-205ENST00000593425 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 SYT15Q9BQS2 421 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 CRTAC1Q9NQ79 661 aa17.52■□□□□ 0.4
LIG1-205ENST00000593425 PDCP20941 246 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 SYT1P21579 422 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 MPLP40238 635 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 MAGEA11P43364 429 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 ZXDBP98169 803 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 DMC1Q14565 340 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 PLK5Q496M5 336 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 SYT13Q7L8C5 426 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 CBWD2Q8IUF1 395 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 PDILTQ8N807 584 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 ATP2A3Q93084 1043 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 HPDLQ96IR7 371 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
LIG1-205ENST00000593425 DUSP15Q9H1R2 295 aaPredicted RBP17.51■□□□□ 0.39
LIG1-205ENST00000593425 ANTXRLA6NF34 631 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 DCLK1O15075 740 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 TCF3P15923 654 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 USP46P62068 366 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 MYO1EQ12965 1108 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 PSMD2Q13200 908 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 KCNB1Q14721 858 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 TCEAL6Q6IPX3 200 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 C4orf50Q6ZRC1 276 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 DPH6Q7L8W6 267 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 DDX1Q92499 740 aaKnown RBP17.5■□□□□ 0.39
LIG1-205ENST00000593425 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 LINC00597Q9H2U6 94 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
LIG1-205ENST00000593425 CDH9Q9ULB4 789 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 ARHGAP26Q9UNA1 814 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 NME7Q9Y5B8 376 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 PCDHGA5Q9Y5G8 931 aa17.5■□□□□ 0.39
LIG1-205ENST00000593425 MORC2Q9Y6X9 1032 aaPredicted RBP17.5■□□□□ 0.39
LIG1-205ENST00000593425 KMT2BQ9UMN6 2715 aaPredicted RBP17.49■□□□□ 0.39
LIG1-205ENST00000593425 HDCP19113 662 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 BDNFP23560 247 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 HOXD13P35453 343 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 SLC39A14Q15043 492 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 STPG1Q5TH74 334 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 CCDC65Q8IXS2 484 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 EXOC4Q96A65 974 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 ACDQ96AP0 544 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 HSPBP1Q9NZL4 362 aa17.49■□□□□ 0.39
LIG1-205ENST00000593425 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 ZNF233A6NK53 670 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 KIAA0391O15091 583 aaKnown RBP17.48■□□□□ 0.39
LIG1-205ENST00000593425 APBB3O95704 486 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 TNNC2P02585 160 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 PDGFRBP09619 1106 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 WARSP23381 471 aaKnown RBP17.48■□□□□ 0.39
LIG1-205ENST00000593425 GRIK1P39086 918 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 OPRD1P41143 372 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 CYP27A1Q02318 531 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 ST3GAL2Q16842 350 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 GAB4Q2WGN9 574 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 N4BP2L1Q5TBK1 243 aaPredicted RBP17.48■□□□□ 0.39
LIG1-205ENST00000593425 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 DENND5BQ6ZUT9 1274 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 PCED1BQ96HM7 432 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 SPATA17Q96L03 361 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 MRPL45Q9BRJ2 306 aaKnown RBP17.48■□□□□ 0.39
LIG1-205ENST00000593425 VPS45Q9NRW7 570 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 EBF1Q9UH73 591 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
LIG1-205ENST00000593425 R3HCC1Q9Y3T6 440 aaKnown RBP17.48■□□□□ 0.39
LIG1-205ENST00000593425 NFATC1O95644 943 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 PMLP29590 882 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 NR1H3Q13133 447 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 SURF1Q15526 300 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 E2F4Q16254 413 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms