RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 CCL26Q9Y258 94 aa18.91■□□□□ 0.62
CIRBP-244ENST00000593283 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 MAN2B1O00754 1011 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 FAM163BP0C2L3 166 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 AVPR1AP37288 418 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 MAGEA9P43362 315 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 SOX9P48436 509 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 NFIL3Q16649 462 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 ZCWPW2Q504Y3 356 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 ARHGAP29Q52LW3 1261 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 C1orf220Q5T0J3 134 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 VSTM1Q6UX27 236 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 CELF5Q8N6W0 485 aaKnown RBP18.9■□□□□ 0.62
CIRBP-244ENST00000593283 FAM3CQ92520 227 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 CLDN23Q96B33 292 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 NELL2Q99435 816 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 GVINP1Q7Z2Y8 2422 aa18.9■□□□□ 0.62
CIRBP-244ENST00000593283 A8MXQ7 604 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 AKAP3O75969 853 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 TRIM49P0CI25 452 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 TRIM49CP0CI26 452 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
CIRBP-244ENST00000593283 CCNE1P24864 410 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 ANXA13P27216 316 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 GRIK1P39086 918 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 PIK3CAP42336 1068 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 RPS9P46781 194 aaKnown RBP18.89■□□□□ 0.61
CIRBP-244ENST00000593283 VAMP7P51809 220 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 FAM160A1Q05DH4 1040 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 FZD5Q13467 585 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 SV2AQ7L0J3 742 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 MON1AQ86VX9 555 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 ZNF687Q8N1G0 1237 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 USP13Q92995 863 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-244ENST00000593283 SPATA17Q96L03 361 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 ZNF518BQ9C0D4 1074 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 SDCBP2Q9H190 292 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 TRPC7Q9HCX4 862 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 TMEM30AQ9NV96 361 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 WDR87Q6ZQQ6 2873 aa18.89■□□□□ 0.61
CIRBP-244ENST00000593283 USP34Q70CQ2 3546 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 PRR23AA6NEV1 266 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 F8VP50 259 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 TRIM66O15016 1216 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 MAPK13O15264 365 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 NCAM2O15394 837 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 HLA-DRAP01903 254 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 SP9P0CG40 484 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 KPNA1P52294 538 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-244ENST00000593283 CACNA2D1P54289 1103 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 CDH8P55286 799 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 PLCB2Q00722 1185 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 TNK2Q07912 1038 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 ASCL5Q7RTU5 278 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 FAM186BQ8IYM0 893 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 MAML2Q8IZL2 1156 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-244ENST00000593283 ENGASEQ8NFI3 743 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 RIN3Q8TB24 985 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 ELOVL4Q9GZR5 314 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 GTSE1Q9NYZ3 720 aa18.88■□□□□ 0.61
CIRBP-244ENST00000593283 EP300Q09472 2414 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-244ENST00000593283 CLDN5O00501 218 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 IKBKBO14920 756 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 LAMTOR5O43504 91 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 RPL13P26373 211 aaKnown RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 CTHP32929 405 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 USP46P62068 366 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 DENND5BQ6ZUT9 1274 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 NKD2Q969F2 451 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 MSANTD3Q96H12 275 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 CEP295NLQ96MC4 621 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 SLC22A12Q96S37 553 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 C8orf33Q9H7E9 229 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.87■□□□□ 0.614e-7■■■■■ 57
CIRBP-244ENST00000593283 TDP1Q9NUW8 608 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 THG1LQ9NWX6 298 aaKnown RBP18.87■□□□□ 0.61
CIRBP-244ENST00000593283 HMGXB4Q9UGU5 601 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 R4GN57 208 aa18.87■□□□□ 0.61
CIRBP-244ENST00000593283 TRAV19A0A0A6YYK7 116 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 C2orf78A6NCI8 922 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 SOBPA7XYQ1 873 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 SPECC1L-ADORA2AF8WAN1 911 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
CIRBP-244ENST00000593283 KRT13P13646 458 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 P4HA1P13674 534 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 GCLMP48507 274 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 MLLT6P55198 1093 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-244ENST00000593283 ADAM9Q13443 819 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 ZNF268Q14587 947 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-244ENST00000593283 SGSM1Q2NKQ1 1148 aa18.86■□□□□ 0.61
CIRBP-244ENST00000593283 EDRF1Q3B7T1 1238 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms