RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CDH9Q9ULB4 789 aa21.91■■□□□ 1.1
TRIM47-207ENST00000593089 TRDMT1O14717 391 aaKnown RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 CLIC2O15247 247 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 YEATS4O95619 227 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 EGFP01133 1207 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 PDGFRBP09619 1106 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 USP17L7P0C7H9 530 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 DLATP10515 647 aaKnown RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 MAGEA11P43364 429 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 PXNP49023 591 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 CYP2J2P51589 502 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 AMPD2Q01433 879 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 CYP27A1Q02318 531 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 SNRNP35Q16560 246 aaKnown RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 FOXD4L6Q3SYB3 417 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 FOXD4L3Q6VB84 417 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 TRAPPC11Q7Z392 1133 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 LIMS2Q7Z4I7 341 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 WDR5BQ86VZ2 330 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 NELFCDQ8IXH7 590 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 ARL14EPQ8N8R7 260 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 FSIP1Q8NA03 581 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 FBRSL1Q9HCM7 1045 aaKnown RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 AGPAT3Q9NRZ7 376 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 DUS2Q9NX74 493 aaKnown RBP21.9■■□□□ 1.1
TRIM47-207ENST00000593089 RALGAPA1Q6GYQ0 2036 aa21.9■■□□□ 1.1
TRIM47-207ENST00000593089 PTPRDP23468 1912 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 C2orf78A6NCI8 922 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 TGFB1I1O43294 461 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 TNNI1P19237 187 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 WARSP23381 471 aaKnown RBP21.89■■□□□ 1.09
TRIM47-207ENST00000593089 BDNFP23560 247 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 HOXA6P31267 233 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 GRIK1P39086 918 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 IFNAR2P48551 515 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 GALK1P51570 392 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 ZNF77Q15935 545 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 NAIF1Q69YI7 327 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-207ENST00000593089 CPA6Q8N4T0 437 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 FNBP1Q96RU3 617 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 C7orf25Q9BPX7 421 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 BLZF1Q9H2G9 400 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 ECT2Q9H8V3 914 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 SLC8A2Q9UPR5 921 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 WNT6Q9Y6F9 365 aa21.89■■□□□ 1.09
TRIM47-207ENST00000593089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 ATG13O75143 517 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 RNF40O75150 1001 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 CST3P01034 146 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 CASP1P29466 404 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 GJA4P35212 333 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 USP4Q13107 963 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 KCNB1Q14721 858 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 MAPRE1Q15691 268 aaKnown RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 CNNM4Q6P4Q7 775 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 VSTM1Q6UX27 236 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 FAM160A2Q8N612 972 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 OSCP1Q8WVF1 389 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 CCDC127Q96BQ5 260 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 CGRRF1Q99675 332 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 P2RY13Q9BPV8 354 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 MRPL45Q9BRJ2 306 aaKnown RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 RTKNQ9BST9 563 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 SEMA4GQ9NTN9 838 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 POLR3BQ9NW08 1133 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 GCNT4Q9P109 453 aa21.88■■□□□ 1.09
TRIM47-207ENST00000593089 HELZP42694 1942 aaKnown RBP21.88■■□□□ 1.09
TRIM47-207ENST00000593089 DCDC2BA2VCK2 349 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 POLR2DO15514 142 aaKnown RBP21.87■■□□□ 1.09
TRIM47-207ENST00000593089 LRP3O75074 770 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 ANXA13P27216 316 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 CYP24A1Q07973 514 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 MDH1BQ5I0G3 518 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 UNC13DQ70J99 1090 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 SH3RF2Q8TEC5 729 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 SCFD1Q8WVM8 642 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 PCED1BQ96HM7 432 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 SPATA17Q96L03 361 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 SNX25Q9H3E2 840 aa21.87■■□□□ 1.09
TRIM47-207ENST00000593089 UBE4BO95155 1302 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.86■■□□□ 1.09
TRIM47-207ENST00000593089 HDCP19113 662 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 DRD1P21728 446 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 GNL1P36915 607 aaPredicted RBP21.86■■□□□ 1.09
TRIM47-207ENST00000593089 USP46P62068 366 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 PSMD6Q15008 389 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 PRR23CQ6ZRP0 262 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 DENND5BQ6ZUT9 1274 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 HS2ST1Q7LGA3 356 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 XXYLT1Q8NBI6 393 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 OR6B3Q8NGW1 331 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 MYCBPAPQ8TBZ2 947 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 ATP2A3Q93084 1043 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 NME7Q9Y5B8 376 aa21.86■■□□□ 1.09
TRIM47-207ENST00000593089 TNNC1P63316 161 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 EHHADHQ08426 723 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 CSRP2Q16527 193 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 EML3Q32P44 896 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 WDR72Q3MJ13 1102 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 NETO1Q8TDF5 533 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms