RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FAM124BQ9H5Z6 455 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-217ENST00000592741 ASNSD1Q9NWL6 643 aa17.41■□□□□ 0.38
PRKCSH-217ENST00000592741 EURLQ9NYK6 297 aa17.41■□□□□ 0.38
PRKCSH-217ENST00000592741 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
PRKCSH-217ENST00000592741 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-217ENST00000592741 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 TSPAN1O60635 241 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 STAU1O95793 577 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 GPD2P43304 727 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 INCA1Q0VD86 236 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 FAM102AQ5T9C2 384 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 FBXW10Q5XX13 1052 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 NT5DC4Q86YG4 428 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 RFX6Q8HWS3 928 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 SRRM1Q8IYB3 904 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 CCT6BQ92526 530 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 PRCCQ92733 491 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 MIS12Q9H081 205 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
PRKCSH-217ENST00000592741 FOXO6A8MYZ6 492 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 MIPP30301 263 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 LDLRAD1Q5T700 205 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 ARHGEF18Q6ZSZ5 1173 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 DPH6Q7L8W6 267 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 TDRPQ86YL5 185 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 CKAP2Q8WWK9 683 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 RSAD2Q8WXG1 361 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 C16orf70Q9BSU1 422 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 VPS37BQ9H9H4 285 aa17.39■□□□□ 0.38
PRKCSH-217ENST00000592741 TCP11X1B4DZS4 312 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 ALOX15BO15296 676 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 NDST1P52848 882 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 CCDC142Q17RM4 750 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 PPP1R21Q6ZMI0 780 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 PPIL6Q8IXY8 311 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 CMASQ8NFW8 434 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 UBA3Q8TBC4 463 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 HSPH1Q92598 858 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 L3MBTL3Q96JM7 780 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 PHACTR1Q9C0D0 580 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 PPCSQ9HAB8 311 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 SAE1Q9UBE0 346 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 KIAA1257Q9ULG3 409 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 USP18Q9UMW8 372 aa17.39■□□□□ 0.37
PRKCSH-217ENST00000592741 RASA4BC9J798 803 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 H3BRB1 525 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 RASA4O43374 803 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 GPD1P21695 349 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 STX2P32856 288 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 PCK1P35558 622 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 CTCFP49711 727 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 ZNF143P52747 638 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 PDIA2Q13087 525 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 FASTKD3Q14CZ7 662 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 HIF1AQ16665 826 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 MAP1SQ66K74 1059 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 MAML1Q92585 1016 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 TUT1Q9H6E5 874 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 TMEM51Q9NW97 253 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 FARP1Q9Y4F1 1045 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 DNM1LO00429 736 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 CD48P09326 243 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 PSMC4P43686 418 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 GRIK4Q16099 956 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 LCLAT1Q6UWP7 414 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 GDAP1Q8TB36 358 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 NT5C1AQ9BXI3 368 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 RSAD1Q9HA92 442 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 MLXIPLQ9NP71 852 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 UBN1Q9NPG3 1134 aa17.38■□□□□ 0.37
PRKCSH-217ENST00000592741 A0A1B0GUA9 196 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 POC1B-GALNT4F8VUJ3 575 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 APOC4-APOC2K7ER74 178 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 MCF2LO15068 1137 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 SNX3O60493 162 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 APOC2P02655 101 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 GRM5P41594 1212 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 SCTRP47872 440 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 GDF10P55107 478 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 ARL4CP56559 192 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 MPP2Q14168 576 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 STILQ15468 1287 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 SPRED3Q2MJR0 410 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 DCAF4L1Q3SXM0 396 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 HP1BP3Q5SSJ5 553 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 OR6B2Q6IFH4 312 aa17.37■□□□□ 0.37
PRKCSH-217ENST00000592741 CNPY3Q9BT09 278 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms