RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 EIF2AK1Q9BQI3 630 aaKnown RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 C22orf23Q9BZE7 217 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 C2orf40Q9H1Z8 148 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 CD248Q9HCU0 757 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 POLD4Q9HCU8 107 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 CD93Q9NPY3 652 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 TOPORSQ9NS56 1045 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 DAXXQ9UER7 740 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 TNFSF13BQ9Y275 285 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 ABCA12Q86UK0 2595 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 TRIP11Q15643 1979 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 ANKRD17O75179 2603 aaKnown RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 NUP210Q8TEM1 1887 aaPredicted RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 KLF18A0A0U1RQI7 1052 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 BRINP1O60477 761 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 USO1O60763 962 aaKnown RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 NDUFS2O75306 463 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 NFATC1O95644 943 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 APODP05090 189 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 TYMPP19971 482 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 ATP2B1P20020 1258 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 ACTN2P35609 894 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 GRIA2P42262 883 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 WASP42768 502 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 NFATC3Q12968 1075 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 SERINC3Q13530 473 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 DHCR24Q15392 516 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 NTRK3Q16288 839 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 INF2Q27J81 1249 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 SLC10A6Q3KNW5 377 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 TBC1D25Q3MII6 688 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 SLC39A12Q504Y0 691 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 CREB3L3Q68CJ9 461 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 PPP4R3AQ6IN85 833 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 RHBDF2Q6PJF5 856 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 DSTYKQ6XUX3 929 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 C12orf40Q86WS4 652 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 MIB1Q86YT6 1006 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 ARL14EPQ8N8R7 260 aaPredicted RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 EXD3Q8N9H8 876 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 STKLD1Q8NE28 680 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 C1orf216Q8TAB5 229 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 DEPTORQ8TB45 409 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 SNRNP27Q8WVK2 155 aaKnown RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 ERLEC1Q96DZ1 483 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 NACC1Q96RE7 527 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 KIFC3Q9BVG8 833 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 MIR1-1HGQ9H1L0 117 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 CDT1Q9H211 546 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 HSPBP1Q9NZL4 362 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 GCNT4Q9P109 453 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 TUBGCP4Q9UGJ1 667 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 PCDHA4Q9UN74 947 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 MYO18AQ92614 2054 aaKnown RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 MUC22E2RYF6 1773 aaPredicted RBP7□□□□□ -1.29
DNMT1-222ENST00000590619 DOPEY1Q5JWR5 2465 aa7□□□□□ -1.29
DNMT1-222ENST00000590619 MYO16Q9Y6X6 1858 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CCDC196A0A1B0GTZ2 297 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 A0A1B0GVT2 93 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TBC1D3BA6NDS4 549 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 METTL12A8MUP2 240 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 BCAT2O15382 392 aaPredicted RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TADA3O75528 432 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 IGHDP01880 384 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CYP17A1P05093 508 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 MYF5P13349 255 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TCF3P15923 654 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 HDCP19113 662 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 NDUFV2P19404 249 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CR2P20023 1033 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 LRPAP1P30533 357 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TNFSF9P41273 254 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 NAMPTP43490 491 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CSNK1EP49674 416 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 GPR15P49685 360 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TMPRSS3P57727 454 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SPAG1Q07617 926 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 VAC14Q08AM6 782 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 USP4Q13107 963 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SF3A1Q15459 793 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 NPY5RQ15761 445 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 ZBTB6Q15916 424 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 KIF19Q2TAC6 998 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SDHAF4Q5VUM1 108 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 DHX32Q7L7V1 743 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 BLIDQ8IZY5 108 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 ZCCHC9Q8N567 271 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CCDC148Q8NFR7 591 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 KCNV2Q8TDN2 545 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 ACO2Q99798 780 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 FAM117AQ9C073 453 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 LSG1Q9H089 658 aaKnown RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 ZCWPW1Q9H0M4 648 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SLC6A17Q9H1V8 727 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms