RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 RABGAP1LQ5R372 815 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 FAM83AQ86UY5 434 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 SEMA4DQ92854 862 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 FSD1LQ9BXM9 530 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 FSCN2O14926 492 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 PAMP19021 973 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 KCNJ2P63252 427 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 FAM84AQ96KN4 292 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 PNMA3Q9UL41 463 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 GRID1Q9ULK0 1009 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 PHRF1Q9P1Y6 1649 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 TAC1P20366 129 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 ATP13A4Q4VNC1 1196 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 BOLA3Q53S33 107 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 SLFN11Q7Z7L1 901 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 CASP2P42575 452 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 ITPRIPL1Q6GPH6 555 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 TWF2Q6IBS0 349 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 TRIM67Q6ZTA4 783 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 DLGAP2Q9P1A6 1054 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 C15orf41Q9Y2V0 281 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 NEMP1O14524 444 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 NCKAP1LP55160 1127 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 CCDC117Q8IWD4 279 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 FRMD8Q9BZ67 464 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 SPC25Q9HBM1 224 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 FAF1Q9UNN5 650 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 SLC4A1P02730 911 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 MRPS35P82673 323 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 POU5F1BQ06416 359 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 PREPLQ4J6C6 727 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 CBX6O95503 412 aa17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 ZNF75CPQ92670 426 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-215ENST00000590574 ASB14A6NK59 587 aa17.83■□□□□ 0.45
SMARCA4-215ENST00000590574 TTC27Q6P3X3 843 aa17.83■□□□□ 0.45
SMARCA4-215ENST00000590574 SLITRK1Q96PX8 696 aa17.83■□□□□ 0.45
SMARCA4-215ENST00000590574 GGA3Q9NZ52 723 aa17.83■□□□□ 0.45
SMARCA4-215ENST00000590574 ADA2Q9NZK5 511 aa17.83■□□□□ 0.45
SMARCA4-215ENST00000590574 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 UBTFL6P0CB48 400 aaPredicted RBP17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 ELK3P41970 407 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 OCRLQ01968 901 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 RSPH3Q86UC2 560 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 NAF1Q96HR8 494 aaKnown RBP17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 SAE1Q9UBE0 346 aaPredicted RBP17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 CCDC78A2IDD5 438 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 KLHL2O95198 593 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 MYL3P08590 195 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 EPHB2P29323 1055 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 CLCN3P51790 818 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 ANO5Q75V66 913 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 SLC26A11Q86WA9 606 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 RNF139Q8WU17 664 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 SLC10A4Q96EP9 437 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 ZNF560Q96MR9 790 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 POLIQ9UNA4 740 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 STXBP5LQ9Y2K9 1186 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 LIASO43766 372 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 HBP1O60381 514 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 TMEM62Q0P6H9 643 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 AGAP11Q8TF27 550 aa17.83■□□□□ 0.44
SMARCA4-215ENST00000590574 IGLV3-22A0A075B6J6 115 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 ATP9AO75110 1047 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 TPI1P60174 286 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 KIF19Q2TAC6 998 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 CCDC60Q8IWA6 550 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 VPS39Q96JC1 886 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 TNIP3Q96KP6 325 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 VDRP11473 427 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 CALB2P22676 271 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 SUDS3Q9H7L9 328 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 DCLRE1BQ9H816 532 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 DPP3Q9NY33 737 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 ADRA1DP25100 572 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 LAMTOR4Q0VGL1 99 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 BMPR2Q13873 1038 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 APPL2Q8NEU8 664 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 KAT2BQ92831 832 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 TAS2R40P59535 323 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 RASA2Q15283 850 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 FASTKD1Q53R41 847 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 TRIML2Q8N7C3 387 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 SHCBP1LQ9BZQ2 653 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 TRPV6Q9H1D0 765 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 ATP8B3O60423 1300 aa17.82■□□□□ 0.44
SMARCA4-215ENST00000590574 LOC100653049A0A140TA62 436 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 GAS2O43903 313 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 KRT34O76011 436 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 CXCL8P10145 99 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 CXCL9Q07325 125 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 LLGL2Q6P1M3 1020 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 FAM172AQ8WUF8 416 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 WNT10BO00744 389 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 AQP5P55064 265 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms