RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 FBXW11Q9UKB1 542 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 SLC27A5Q9Y2P5 690 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 MTCH2Q9Y6C9 303 aa16.08■□□□□ 0.16
ATG4D-211ENST00000589753 PRRG1O14668 218 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 SEC24AO95486 1093 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 PLEKP08567 350 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CFHP08603 1231 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 HAPLN1P10915 354 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-211ENST00000589753 NPR3P17342 541 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CHRNB2P17787 502 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 IGFBP4P22692 258 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 GRIK1P39086 918 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 TUFMP49411 452 aaKnown RBP16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CDK17Q00537 523 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 FMO1Q01740 532 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
ATG4D-211ENST00000589753 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 MGAT5BQ3V5L5 792 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 PKDCCQ504Y2 493 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 DENND1BQ6P3S1 775 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CLEC20AQ6ZU45 233 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 PASD1Q8IV76 773 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 TTC9BQ8N6N2 239 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 KREMEN2Q8NCW0 462 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 UBA3Q8TBC4 463 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 SLC22A17Q8WUG5 538 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 SYT11Q9BT88 431 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CRISPLD1Q9H336 500 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CSNK1G1Q9HCP0 422 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 SEPT11Q9NVA2 429 aaKnown RBP16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 HCFC2Q9Y5Z7 792 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 PLXNA3P51805 1871 aa16.07■□□□□ 0.16
ATG4D-211ENST00000589753 CHD7Q9P2D1 2997 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 TRIM66O15016 1216 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 EPCAMP16422 314 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 ANXA13P27216 316 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 MAP3K7CLP57077 242 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
ATG4D-211ENST00000589753 PDE4CQ08493 712 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 LIN9Q5TKA1 542 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 LLGL2Q6P1M3 1020 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 ELMSAN1Q6PJG2 1045 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 CCDC149Q6ZUS6 474 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 Q7L0L9 218 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
ATG4D-211ENST00000589753 KCNK16Q96T55 309 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 CHP1Q99653 195 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 SMOQ99835 787 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 PLEKHA4Q9H4M7 779 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 DMAP1Q9NPF5 467 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-211ENST00000589753 MAN1C1Q9NR34 630 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 TMEM30AQ9NV96 361 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 LAMA3Q16787 3333 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 PTPRDP23468 1912 aa16.06■□□□□ 0.16
ATG4D-211ENST00000589753 SSU72P8A0A1W2PR75 194 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 F8VP50 259 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 XPO1O14980 1071 aaKnown RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 SOAT2O75908 522 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 BEST1O76090 585 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 LSM8O95777 96 aaKnown RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 C8AP07357 584 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 FECHP22830 423 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 GPD2P43304 727 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 ALDH1A3P47895 512 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 HYAL1Q12794 435 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 TMEM35BQ8NCS4 154 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 ZMIZ2Q8NF64 920 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 C8orf48Q96LL4 319 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 PCDHB18PQ96TA0 734 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 NHEJ1Q9H9Q4 299 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-211ENST00000589753 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
ATG4D-211ENST00000589753 CYP1A1P04798 512 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-211ENST00000589753 CDH5P33151 784 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-211ENST00000589753 PLA2G4AP47712 749 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 GPR15P49685 360 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms