RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 SPPL2BQ8TCT7 592 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 TNIP3Q96KP6 325 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 S1PR5Q9H228 398 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 ABI2Q9NYB9 513 aaPredicted RBP22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 GTF3C4Q9UKN8 822 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 PCDHB5Q9Y5E4 795 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 PCDHB4Q9Y5E5 795 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 INSL5Q9Y5Q6 135 aa22.59■■□□□ 1.21
R3HDM4-204ENST00000589428 CYP26A1O43174 497 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 MBTPS2O43462 519 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 SEC24AO95486 1093 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 SERPING1P05155 500 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 CLCN1P35523 988 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 DUSP4Q13115 394 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 TMEM270Q6UE05 265 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 TMTC1Q8IUR5 882 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 RIPOR3Q96MK2 946 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 DNAI2Q9GZS0 605 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 PIDD1Q9HB75 910 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 ACP6Q9NPH0 428 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 HSFX1Q9UBD0 423 aa22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 USP15Q9Y4E8 981 aaPredicted RBP22.58■■□□□ 1.21
R3HDM4-204ENST00000589428 XYLBO75191 536 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 VNN2O95498 520 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 KCNQ1P51787 676 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 ZNF132P52740 706 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 YWHAEP62258 255 aaKnown RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 KLHL30Q0D2K2 578 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 INCA1Q0VD86 236 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 PLD1Q13393 1074 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 MTF1Q14872 753 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 TDRD12Q587J7 1177 aaKnown RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 C4orf50Q6ZRC1 276 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 GPR149Q86SP6 731 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 UNC93AQ86WB7 457 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 SPATA2LQ8IUW3 424 aaPredicted RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 RBBP8NLQ8NC74 664 aaPredicted RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 SMG7Q92540 1137 aaKnown RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 PKMYT1Q99640 499 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 PRKD2Q9BZL6 878 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 FAM124BQ9H5Z6 455 aaPredicted RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 HAUS4Q9H6D7 363 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 YIPF1Q9Y548 306 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 NME7Q9Y5B8 376 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 MYBPHLA2RUH7 354 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 CCL16O15467 120 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 NRDCO43847 1150 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 ATP2C2O75185 946 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 NDST1P52848 882 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 PTK2Q05397 1052 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 ATAT1Q5SQI0 421 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 RAD9BQ6WBX8 426 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 SLC47A2Q86VL8 602 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 B3GALNT2Q8NCR0 500 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 MYLPFQ96A32 169 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 ASB2Q96Q27 587 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 SEPT5Q99719 369 aaPredicted RBP22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 DPEP3Q9H4B8 488 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 CRTAC1Q9NQ79 661 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 TMLHEQ9NVH6 421 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 HMGXB4Q9UGU5 601 aa22.57■■□□□ 1.2
R3HDM4-204ENST00000589428 GRXCR2A6NFK2 248 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 ARHGAP6O43182 974 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 PTPN1P18031 435 aaKnown RBP22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 MTHFRP42898 656 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 CDR1P51861 262 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 CCDC142Q17RM4 750 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 MGAT5BQ3V5L5 792 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 MDH1BQ5I0G3 518 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 FAM171BQ6P995 826 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 ELMOD1Q8N336 334 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 MYCBPAPQ8TBZ2 947 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 EPS8L1Q8TE68 723 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 ZNF707Q96C28 371 aaPredicted RBP22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 NECTIN4Q96NY8 510 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 NT5C1AQ9BXI3 368 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 RHOBTB2Q9BYZ6 727 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 CRISPLD1Q9H336 500 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 NHEJ1Q9H9Q4 299 aaPredicted RBP22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 ABCB6Q9NP58 842 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 SLC27A5Q9Y2P5 690 aa22.56■■□□□ 1.2
R3HDM4-204ENST00000589428 CILPO75339 1184 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 CALCAP01258 141 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 POU2F2P09086 479 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 CCDC172P0C7W6 258 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 EIF4A3P38919 411 aaKnown RBP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 ALDH1A3P47895 512 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 TUFMP49411 452 aaKnown RBP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 CYP27A1Q02318 531 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 CBX2Q14781 532 aaPredicted RBP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 ZNF571Q7Z3V5 609 aaPredicted RBP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 OLIG1Q8TAK6 271 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 WHAMMQ8TF30 809 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 SUSD6Q92537 303 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 FUBP3Q96I24 572 aaKnown RBP eCLIP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 SYT11Q9BT88 431 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 PYCARDQ9ULZ3 195 aa22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 BZW2Q9Y6E2 419 aaKnown RBP22.55■■□□□ 1.2
R3HDM4-204ENST00000589428 PAPLNO95428 1278 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms