RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 PBXIP1Q96AQ6 731 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 TTLL2Q9BWV7 592 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 OBP2AQ9NY56 170 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 EHD2Q9NZN4 543 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 GRIK1P39086 918 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 GPC5P78333 572 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 SDHAF4Q5VUM1 108 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 DENND5BQ6ZUT9 1274 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 ACOT1Q86TX2 421 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 SCN4BQ8IWT1 228 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 FUKQ8N0W3 1084 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 FBXL6Q8N531 539 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 DEPDC1BQ8WUY9 529 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 GCNAQ96QF7 691 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 PLA2G2FQ9BZM2 168 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 ZNF518BQ9C0D4 1074 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 CSNK1G1Q9HCP0 422 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 TRPV5Q9NQA5 729 aa18.68■□□□□ 0.58
H3F3B-207ENST00000589417 F8VP50 259 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 CCDC192P0DO97 292 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 TRIM21P19474 475 aaKnown RBP18.67■□□□□ 0.58
H3F3B-207ENST00000589417 PFKPQ01813 784 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 GPR158Q5T848 1215 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 MON1AQ86VX9 555 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 MFSD6LQ8IWD5 586 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 LMO3Q8TAP4 145 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 TATDN2Q93075 761 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 TWNKQ96RR1 684 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
H3F3B-207ENST00000589417 KXD1Q9BQD3 176 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 SLC46A2Q9BY10 475 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 DNAI2Q9GZS0 605 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 TMEM30AQ9NV96 361 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 IL37Q9NZH6 218 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 HMGXB4Q9UGU5 601 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 ARIH1Q9Y4X5 557 aaPredicted RBP18.67■□□□□ 0.58
H3F3B-207ENST00000589417 ATP8B3O60423 1300 aa18.67■□□□□ 0.58
H3F3B-207ENST00000589417 CLDN5O00501 218 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 TADA3O75528 432 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 PFKLP17858 780 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 PSMC3P17980 439 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 ANXA13P27216 316 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 PPP3CCP48454 512 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 CACNA2D1P54289 1103 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 FCHO2Q0JRZ9 810 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 CETN1Q12798 172 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 STXBP5Q5T5C0 1151 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 FAM35AQ86V20 835 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 IRF2BP1Q8IU81 584 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 ARID3BQ8IVW6 561 aaPredicted RBP18.66■□□□□ 0.58
H3F3B-207ENST00000589417 SMARCD1Q96GM5 515 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 COMMD8Q9NX08 183 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 DACH1Q9UI36 760 aa18.66■□□□□ 0.58
H3F3B-207ENST00000589417 TNFRSF10BO14763 440 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 CLSTN1O94985 981 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 MBD3O95983 291 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 NPR3P17342 541 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 CLCN5P51795 746 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 CUL2Q13617 745 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 DPCR1Q3MIW9 517 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 VITQ6UXI7 678 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 CMTM8Q8IZV2 173 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 UBR7Q8N806 425 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 C12orf29Q8N999 325 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 ST13P5Q8NFI4 369 aaPredicted RBP18.65■□□□□ 0.58
H3F3B-207ENST00000589417 MRPS31Q92665 395 aaKnown RBP18.65■□□□□ 0.58
H3F3B-207ENST00000589417 DNASE1L2Q92874 299 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 KCNH6Q9H252 994 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 SLITRK6Q9H5Y7 841 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 DMAP1Q9NPF5 467 aaPredicted RBP18.65■□□□□ 0.58
H3F3B-207ENST00000589417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.586e-7■■■■□ 20.3
H3F3B-207ENST00000589417 CISHQ9NSE2 258 aa18.65■□□□□ 0.58
H3F3B-207ENST00000589417 MAGED2Q9UNF1 606 aaPredicted RBP18.65■□□□□ 0.58
H3F3B-207ENST00000589417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.65■□□□□ 0.58
H3F3B-207ENST00000589417 FAM92AA1XBS5 289 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 KRBA1A5PL33 1030 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 HEPACAM2A8MVW5 462 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 PDGFBP01127 241 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-207ENST00000589417 AFPP02771 609 aaKnown RBP18.64■□□□□ 0.57
H3F3B-207ENST00000589417 CFHP08603 1231 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 TBXAS1P24557 533 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-207ENST00000589417 VIPR2P41587 438 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 NUBP1P53384 320 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 MLLT6P55198 1093 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-207ENST00000589417 STARD6P59095 220 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 USP46P62068 366 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 CYP4F8P98187 520 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 ZNF268Q14587 947 aaPredicted RBP18.64■□□□□ 0.57
H3F3B-207ENST00000589417 SMYD5Q6GMV2 418 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 PHLDB3Q6NSJ2 640 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 NUP93Q8N1F7 819 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 STKLD1Q8NE28 680 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 ZMIZ2Q8NF64 920 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 SLC2A14Q8TDB8 520 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 RSPRY1Q96DX4 576 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 CYFIP2Q96F07 1278 aa18.64■□□□□ 0.57
H3F3B-207ENST00000589417 KCNK16Q96T55 309 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms