RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MCM6Q14566 821 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 C19orf48Q6RUI8 117 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 SCN4BQ8IWT1 228 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 CD302Q8IX05 232 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 ALLCQ8N6M5 410 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 ATP2A3Q93084 1043 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 ERLEC1Q96DZ1 483 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
SF3A2-204ENST00000589118 DDX43Q9NXZ2 648 aaKnown RBP16.23■□□□□ 0.19
SF3A2-204ENST00000589118 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 ADAMTS20P59510 1910 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 DSPP15924 2871 aaKnown RBP16.22■□□□□ 0.19
SF3A2-204ENST00000589118 TRAV19A0A0A6YYK7 116 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 SGK1O00141 431 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 LAD1O00515 517 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 ENGP17813 658 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 TIE1P35590 1138 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 SIM1P81133 766 aaPredicted RBP16.22■□□□□ 0.19
SF3A2-204ENST00000589118 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
SF3A2-204ENST00000589118 CRY1Q16526 586 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 CHCHD4Q8N4Q1 142 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 OLIG1Q8TAK6 271 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
SF3A2-204ENST00000589118 TSPAN18Q96SJ8 248 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 PKMYT1Q99640 499 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 BLOC1S4Q9NUP1 217 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 AGO2Q9UKV8 859 aaKnown RBP16.22■□□□□ 0.19
SF3A2-204ENST00000589118 MMP17Q9ULZ9 603 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 DERAQ9Y315 318 aa16.22■□□□□ 0.19
SF3A2-204ENST00000589118 NBEAQ8NFP9 2946 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 H0YCG3 227 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 MAP3K13O43283 966 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 EIF5BO60841 1220 aaKnown RBP16.21■□□□□ 0.19
SF3A2-204ENST00000589118 KLF8O95600 359 aaPredicted RBP16.21■□□□□ 0.19
SF3A2-204ENST00000589118 ITGB3P05106 788 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 HDCP19113 662 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 POLR2BP30876 1174 aaKnown RBP16.21■□□□□ 0.19
SF3A2-204ENST00000589118 USP46P62068 366 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 TSPY1Q01534 308 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 GRIN1Q05586 938 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 SV2CQ496J9 727 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 C12orf40Q86WS4 652 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 TXNDC5Q8NBS9 432 aaKnown RBP16.21■□□□□ 0.19
SF3A2-204ENST00000589118 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 ASB7Q9H672 318 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 ZMYM5Q9UJ78 669 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
SF3A2-204ENST00000589118 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.21■□□□□ 0.19
SF3A2-204ENST00000589118 ANKRD11Q6UB99 2663 aaPredicted RBP16.21■□□□□ 0.18
SF3A2-204ENST00000589118 TMEM8BA6NDV4 472 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 KRT18P05783 430 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 CHRM1P11229 460 aaPredicted RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 PLCG1P19174 1290 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 ITPKAP23677 461 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 ADSSP30520 456 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 P2RY2P41231 377 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 ZNF131P52739 623 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 TFAMQ00059 246 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 GTF2BQ00403 316 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 KCNA1Q09470 495 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 NR1H3Q13133 447 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 IL17RCQ8NAC3 791 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 HMGB4Q8WW32 186 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 TRMT2BQ96GJ1 504 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 MYRFLQ96LU7 910 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 GTPBP2Q9BX10 602 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 RNF38Q9H0F5 515 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 PARVGQ9HBI0 331 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 SMPD4Q9NXE4 827 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 MSRB2Q9Y3D2 182 aa16.2■□□□□ 0.18
SF3A2-204ENST00000589118 MYO18AQ92614 2054 aaKnown RBP16.2■□□□□ 0.18
SF3A2-204ENST00000589118 DMXL2Q8TDJ6 3036 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 LEFTY2O00292 366 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 CYP17A1P05093 508 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 CFIP05156 583 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 PAX3P23760 479 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 RPL10AP62906 217 aaKnown RBP16.19■□□□□ 0.18
SF3A2-204ENST00000589118 HMGN5P82970 282 aaKnown RBP16.19■□□□□ 0.18
SF3A2-204ENST00000589118 KDSRQ06136 332 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-204ENST00000589118 LPCAT2Q7L5N7 544 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 PIP4P1Q86T03 277 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 PGBD3Q8N328 593 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 C1orf127Q8N9H9 656 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 KCNN1Q92952 543 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 CAMK1GQ96NX5 476 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 ACBD6Q9BR61 282 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 NUSAP1Q9BXS6 441 aaKnown RBP16.19■□□□□ 0.18
SF3A2-204ENST00000589118 TMEM206Q9H813 350 aa16.19■□□□□ 0.18
SF3A2-204ENST00000589118 UXTQ9UBK9 157 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms